Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00920 ATGGCTATCCTTACATTATTCTTGGCGCTATTGCTGCAACTGCCTTGCATTTTCGCCACTGGTTCTTTCTTACACTCAACTGATTGTGGTCCTAATGGGGTAGCCTACTCATATGCACTTGGCGAAGAATTTTACTACTTAAACGAGAATATAGTGGACAAAGTTACTTTCTGCAAGACCCTCCAGTTGCATATTGCAAATGGTTGTGATTTGAAGGACTACTTTGAAAGTAGCAACTGTGCCTTGGATGTTGTTGCAGTTAATTCACCTTCAAAGGCAGGAAGAAAACTTCTGCAGAAGGATTTAAACAATATTTCCCCATCTCAATCCCACCAAAATGTTACAAAGAATGTGTCATTATCTCATGTTGGGATAGCTGCATGTGGAGCTTTCTTGGCATGTTGTGGAGCTATCTGTCCTTGTATCTATGGGAAGAGACCAAAAGCCACTACTCATGCTGATTTGACCAAGGACACACATTCAATTGATTCGGCTTCCCCCTTTGATGTAAATGCTGTTTCTGAAAAGGTGCCTGCAAGTCCACTTCGTGTGCCACCTAGTCCTTCAAGATTCTCATTGTCCCCAAAACTCAGTAGAATTGGGTCATTACATCTTAACTTGAGTCAAATTATAAGAGCTACCAATAATTTCTCAGATACTTTTAAAATAGGAGAAGGTGGTTTCGGAACTGTCTACAGGGCTCAGATCGAAGATGGATTGGTTGTGGCTGTAAAACGTGCAAAAAGGGAACATTTTGAGACGTTGAGAACTGAATTCAGCAGTGAGGTTGAAATCCTGGCCAAAATTGATCATCGAAACTTGGTGAAGCTACTAGGTTACATTGACAAAGGAAATGAACGCCTTCTTATTACTGAATATGTGCCAAATGGTTCTCTGAGAGAACATTTGGATGGTCTACGTGGAAATATCCTAGATTTCAATCAGCGCCTTGAAATTGCTATTGATGTTGCTCATGGATTAACCTATCTGCATACATATGCAGAAAAGCAGATTATCCATCGAGATGTGAAATCGTCCAACATTCTTCTAACGGAAAGCATGAGAGCCAAAGTTGCAGATTTTGGATTTGCAAAGATCGGTCCCGCAAACTCTGATCAGACACACATTTCAACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCTGAGTACATGAAAACATACCAACTCACTGCCAAGAGTGATGTCTACTCATTTGGGATTTTGCTCCTAGAAATTGTGTCAGGCCGCCGTCCGGTGGAGTTGAAGAAACCAGTTGAAGATCGGGTTACATTACGATGGGCGTTCAGGAAGTTCCATGAAGGAGATGTGTTGGCACTGCTGGATCCTGCAATGAGGGAAAGTGTAAAAACGGAGGTTGTCATGAAGATGATTGAGTTGGCATTTCAATGCGCAGCAGCCCCAGTTCGAGCGGATCGACCCGACATGAAATCAGTGGTCCAGCAATTGTGGACCATTAGAGCAGAATACCTCAAGGGTGCAAGGAGGTCGTAG 1515 0.4264 MAILTLFLALLLQLPCIFATGSFLHSTDCGPNGVAYSYALGEEFYYLNENIVDKVTFCKTLQLHIANGCDLKDYFESSNCALDVVAVNSPSKAGRKLLQKDLNNISPSQSHQNVTKNVSLSHVGIAACGAFLACCGAICPCIYGKRPKATTHADLTKDTHSIDSASPFDVNAVSEKVPASPLRVPPSPSRFSLSPKLSRIGSLHLNLSQIIRATNNFSDTFKIGEGGFGTVYRAQIEDGLVVAVKRAKREHFETLRTEFSSEVEILAKIDHRNLVKLLGYIDKGNERLLITEYVPNGSLREHLDGLRGNILDFNQRLEIAIDVAHGLTYLHTYAEKQIIHRDVKSSNILLTESMRAKVADFGFAKIGPANSDQTHISTKVKGTVGYLDPEYMKTYQLTAKSDVYSFGILLLEIVSGRRPVELKKPVEDRVTLRWAFRKFHEGDVLALLDPAMRESVKTEVVMKMIELAFQCAAAPVRADRPDMKSVVQQLWTIRAEYLKGARRS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00920 504 ProSitePatterns Protein kinases ATP-binding region signature. 223 245 IPR017441 GO:0005524
Accr12g00920 504 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 189 293 - -
Accr12g00920 504 Pfam Protein tyrosine and serine/threonine kinase 222 490 IPR001245 GO:0004672|GO:0006468
Accr12g00920 504 Gene3D Transferase(Phosphotransferase) domain 1 294 502 - -
Accr12g00920 504 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 294 504 - -
Accr12g00920 504 CDD STKc_IRAK 223 490 - -
Accr12g00920 504 Gene3D Phosphorylase Kinase; domain 1 190 293 - -
Accr12g00920 504 ProSiteProfiles Protein kinase domain profile. 217 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00920 504 SUPERFAMILY Protein kinase-like (PK-like) 199 493 IPR011009 -
Accr12g00920 504 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 92 495 - -
Accr12g00920 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Accr12g00920 504 SMART serkin_6 217 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00920 Accr-Chr12 9462508 9467355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00920 126 490 Receptor kinase-like Gene Family AT3G46290 40.108 3.79e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Accr12g00920 PK_Tyr_Ser-Thr 2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00920 - - gmx:100798260 700.279