Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00902 ATGGAGAAGAAGTGTGGGTGCTGGGCTGTTCTGAAACGCGGCGTTAGAGGTGCGTGCAAACCCTCAGCTCCTAGAGACTCTGCTTCCTCTATTCCTCGTACTAGTCTCGTTTATGATGCAGCAACTGAGACACGTTACCTGAATGCTAGTAATCGAGAGTTATGTCCTCCCAATGATGCTCAACTATCTTATGATAATACTGTACCCCTGCCTGAGGAAAACAGGGCTCCTTGCCAGCTTCTTCAATTTTCTTTTCAGGAACTAAAGGCTGCAACTGGAAATTTCAGACCTGATAGCATTCTTGGGGAAGGTGGATTTGGATTTGTGTTCAAGGGATGGATAGAAGAAAATGGGACAGCCCCAGCGAAACCAGGTTCTGGGGTTACAGTGGCTGTTAAAAGCTTGAAGCCAGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAAGTTGACTTCCTCGGACAGCTTCACCATCCTAACCTCGTGAAACTTATTGGCTACTGTAGTGAAGATGATCAGCGGCTTCTTGTTTATGAGTTTATGACCCGTGGAAGCTTGGAAAATCATCTTTTCAGAAGAACTGTACCTCTTCCATGGTCCAATAGGGTAAAGATCGCACTTGGTGCAGCTAAAGGCTTGGCCTTCCTCCATAGTGGTCCAGAACCAGTCATTTATAGAGATTTTAAAACGTCAAACATTTTGCTTGATTCGGAATATAATGCAAAGCTTTCAGATTTTGGTCTCGCTAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCTACCAGAGTTGTTGGAACTTATGGTTATGCTGCTCCTGAATATGTCATGACAGGCCACTTGACAGCTAAAAGTGATGTTTATAGCTTTGGAGTTGTATTACTTGAGATTTTAACAGGGAGAAGATCTATGGACAAGAAGCGCCCTAGTGGGGAACAAAATCTGGTATCATGGGCTCGGCCATATTTAGCTGACAAGCGAAAGCTATACCAACTTGTGGATCCTCGCTTGGAACTAAACTATTCTCTCAAAGGGGTGCAGAAAATTTCTCAGTTAGCTCATAGTTGCCTCAGTAGGGACCCCAAAGGCCGTCCAAACATGGATGAAGTTGTGAAGGCTCTGACTCCATTGCAGGATCTCAATGATCTCGCGATCTTATCTTACCACTCCCGTTCGTTGTCTCAACAAGGGAGAAGAAAAAAGAAAGCAGATGGAACTCCACATCCACAGCTTACCTACACACAATCCAAGAGCATCAAGGGTACTTCTCCCTTGAACACCAGCAAGCATCATCGATGA 1299 0.4519 MEKKCGCWAVLKRGVRGACKPSAPRDSASSIPRTSLVYDAATETRYLNASNRELCPPNDAQLSYDNTVPLPEENRAPCQLLQFSFQELKAATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGVTVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCSEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHSGPEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAHSCLSRDPKGRPNMDEVVKALTPLQDLNDLAILSYHSRSLSQQGRRKKKADGTPHPQLTYTQSKSIKGTSPLNTSKHHR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00902 432 CDD STKc_IRAK 101 377 - -
Accr12g00902 432 FunFam Serine/threonine-protein kinase BIK1 64 180 - -
Accr12g00902 432 SUPERFAMILY Protein kinase-like (PK-like) 78 382 IPR011009 -
Accr12g00902 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Accr12g00902 432 Gene3D Transferase(Phosphotransferase) domain 1 181 391 - -
Accr12g00902 432 MobiDBLite consensus disorder prediction 408 425 - -
Accr12g00902 432 ProSiteProfiles Protein kinase domain profile. 95 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00902 432 FunFam Probable serine/threonine-protein kinase PBL8 181 394 - -
Accr12g00902 432 MobiDBLite consensus disorder prediction 391 432 - -
Accr12g00902 432 Pfam Protein tyrosine and serine/threonine kinase 99 374 IPR001245 GO:0004672|GO:0006468
Accr12g00902 432 Gene3D Phosphorylase Kinase; domain 1 71 180 - -
Accr12g00902 432 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Accr12g00902 432 PANTHER OS01G0588500 PROTEIN-RELATED 77 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00902 Accr-Chr12 9217536 9220390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00902 83 374 Glycoside Hydrolase AT3G07070 56.081 7.61e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr12g00902 PK_Tyr_Ser-Thr 6.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00902 - - aprc:113848012 797.734