Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00901 ATGGAGAAGAAGTGTGGGTGCTGGGCTGTTCTGAAACGCGGCGTTAGAGCAACTGAGACACGTTACCTGAATGCTAGTAATCGAGAGTTATGTCCTCCCAATGATGCTCAACTATCTTATGATAATACTGTACCCCTGCCTGAGGAAAACAGGGCTCCTTGCCAGCTTCTTCAATTTTCTTTTCAGGAACTAAAGGCTGCAACTGGAAATTTCAGACCTGATAGCATTCTTGGGGAAGGTGGATTTGGATTTGTGTTCAAGGGATGGATAGAAGAAAATGGGACAGCCCCAGCGAAACCAGGTTCTGGGGTTACAGTGGCTGTTAAAAGCTTGAAGCCAGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAAGTTGACTTCCTCGGACAGCTTCACCATCCTAACCTCGTGAAACTTATTGGCTACTGTAGTGAAGATGATCAGCGGCTTCTTGTTTATGAGTTTATGACCCGTGGAAGCTTGGAAAATCATCTTTTCAGAAGAACTGTACCTCTTCCATGGTCCAATAGGGTAAAGATCGCACTTGGTGCAGCTAAAGGCTTGGCCTTCCTCCATAGTGGTCCAGAACCAGTCATTTATAGAGATTTTAAAACGTCAAACATTTTGCTTGATTCGGAATATAATGCAAAGCTTTCAGATTTTGGTCTCGCTAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCTACCAGAGTTGTTGGAACTTATGGTTATGCTGCTCCTGAATATGTCATGACAGGCCACTTGACAGCTAAAAGTGATGTTTATAGCTTTGGAGTTGTATTACTTGAGATTTTAACAGGGAGAAGATCTATGGACAAGAAGCGCCCTAGTGGGGAACAAAATCTGGTATCATGGGCTCGGCCATATTTAGCTGACAAGCGAAAGCTATACCAACTTGTGGATCCTCGCTTGGAACTAAACTATTCTCTCAAAGGGGTGCAGAAAATTTCTCAGTTAGCTCATAGTTGCCTCAGTAGGGACCCCAAAGGCCGTCCAAACATGGATGAAGTTGTGAAGGCTCTGACTCCATTGCAGGATCTCAATGATCTCGCGATCTTATCTTACCACTCCCGTTCGTTGTCTCAACAAGGGAGAAGAAAAAAGAAAGCAGATGGAACTCCACATCCACAGCTTACCTACACACAATCCAAGAGCATCAAGGGTACTTCTCCCTTGAACACCAGCAAGCATCATCGATGA 1227 0.4491 MEKKCGCWAVLKRGVRATETRYLNASNRELCPPNDAQLSYDNTVPLPEENRAPCQLLQFSFQELKAATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGVTVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCSEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHSGPEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAHSCLSRDPKGRPNMDEVVKALTPLQDLNDLAILSYHSRSLSQQGRRKKKADGTPHPQLTYTQSKSIKGTSPLNTSKHHR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00901 408 MobiDBLite consensus disorder prediction 367 408 - -
Accr12g00901 408 PANTHER OS01G0588500 PROTEIN-RELATED 54 354 - -
Accr12g00901 408 ProSiteProfiles Protein kinase domain profile. 71 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00901 408 Pfam Protein tyrosine and serine/threonine kinase 75 350 IPR001245 GO:0004672|GO:0006468
Accr12g00901 408 ProSitePatterns Protein kinases ATP-binding region signature. 77 109 IPR017441 GO:0005524
Accr12g00901 408 SUPERFAMILY Protein kinase-like (PK-like) 54 358 IPR011009 -
Accr12g00901 408 Gene3D Phosphorylase Kinase; domain 1 52 156 - -
Accr12g00901 408 CDD STKc_IRAK 77 353 - -
Accr12g00901 408 FunFam Serine/threonine-protein kinase BIK1 40 156 - -
Accr12g00901 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Accr12g00901 408 MobiDBLite consensus disorder prediction 384 401 - -
Accr12g00901 408 FunFam Probable serine/threonine-protein kinase PBL8 157 370 - -
Accr12g00901 408 Gene3D Transferase(Phosphotransferase) domain 1 157 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00901 Accr-Chr12 9217536 9220390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00901 59 350 Glycoside Hydrolase AT3G07070 56.081 5.21e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr12g00901 PK_Tyr_Ser-Thr 5.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00901 - - gmx:100305441 743.421