Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00885 ATGGGGAAGCAGATGGGTTTGATAGGGTTGCTGATGGTCGTGGTGTGTTTATCATTTGCAGCATCGTCGTTGGAGGCAAGACGATACATTGTCGGCGGCGATTTTGGATGGGGTATCCCTCCCAATCAAACCTTCTATTCCGACTGGGCTTCTAACAAGACCTTCCTCGTGGGAGACAAACTCGTGTTCAATTGGACTGGAAATCAGGACGTGGCTGATGTACGAAAGGAGGATTACAACAACTGCACCACCCCCAACACCATCATCTTCACCGGCGGTCCCAACATGACGGTGTTTATATTTATTCTCGTCATTCCCGGACCTCACTACTACATCTCCACCATCGACGACAACTGTGAAAAAGGCCAGAAGTTCAGTATCGACGTTAAGTGGCCTTTCTCTACTTATGCTCCTCCTCCTACTCCAACCACTCCTTAA 438 0.4886 MGKQMGLIGLLMVVVCLSFAASSLEARRYIVGGDFGWGIPPNQTFYSDWASNKTFLVGDKLVFNWTGNQDVADVRKEDYNNCTTPNTIIFTGGPNMTVFIFILVIPGPHYYISTIDDNCEKGQKFSIDVKWPFSTYAPPPTPTTP 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00885 145 FunFam Cupredoxin superfamily protein 26 134 - -
Accr12g00885 145 PANTHER BLUE COPPER PROTEIN 27 129 IPR039391 GO:0009055
Accr12g00885 145 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Accr12g00885 145 Pfam Plastocyanin-like domain 41 123 IPR003245 GO:0009055
Accr12g00885 145 Gene3D - 24 131 IPR008972 -
Accr12g00885 145 SUPERFAMILY Cupredoxins 26 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00885 Accr-Chr12 8991005 8991766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00885 12 142 Phytocyanin Superfamily AT2G25060 37.500 1.28e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00885 - - pcin:129319405 176.022