Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00848 ATGGCCACGTCCAAGGCCATAGCCAGAGACGAATCTGATTATGACAGTAGCTCCTCCTCCCTCACCACTCTGCCGGAATCCAGCCGGAGCTGGATGACCAACCTCAGCTTCAGCAGCCGCCGCCGCAGCAGCTCCGTTTCCGTCTGTTCCTCCACCACCACAGACACCACCACCACCTCCTCTCTGTACCTCAGCTCCCACGCCAAGCCTCACAAGGCCAACCAAGCAGCATGGGAGGCCATGTCCCGCCTCCGCCGCGACAGCAACGGCCACCTAGGCCTACACCACTTCCGCCTCCTCCGGCGTCTCGGCGGCGGCGACCTCGGCAACGTCTACCTCTGTCAGATTAGAAACCCCCTCGTTGTTGGGTCAAAACAGAGTCTTTACGCCATGAAAGTTGTGGACAGAGAAGCACTTTCAGTGAGAAACAAGTTGCAGAGAGCTCAAATGGAGAAAGAAATTCTGGGCATGCTTGATCACCCATTTTTACCGACTTTATATGCTGAGTTCGATGCTTCTCATTACTCTTGCTTGGTCATGGAGTTCTGTCCTGGTGGTGATTTATATGCTTCTCGCCAGCGGCAGCCAGGAAAACGATTCAGTATTCAATCGACCAAGTTTTATGCAGCTGAGACACTGTTGGCTATGGAATATCTTCACATGATGGGTATAGTGTACAGAGATTTGAAGCCAGAGAATGTGTTAGTGAGAGAGGATGGGCATATTATGCTCTCTGATTTTGATCTCTCTCTCAAGTGTGATGTTGTTCCTAAGCTCTTGAGAAGTAAATCCAGTTTCAAAAATACCCCAAGAGGCTCATCATCATCAACAACAGCACATCCTGCCTGTGCTGCCCCCATGCAATCTTGTTTCTCATCAGCTTCATTTCGCAGCAAGAGCAAGAGAGAAAATAGAGTCATTACAATCATAAGGGAAAATGCCGGAGTCCAAAAGCAACAGGAACAAAAAGAAGACGAAGGAGAAGAAGACGTTGATGACGAAGAAGATGATGAGCCTGAGCTAGTGGCTGAGCCTATAAATGCAAAGTCTATGTCATTTGTAGGGACTCATGAGTACTTAGCACCAGAAGTGATCTCAGGGCAAGGCCATGGAAGTGCAGTGGATTGGTGGACTTTTGGGGTGTTCTTGTATGAGATGCTATATGGAAGAACACCATTCAAAGGAGAGAACAATAGCAAAACACTCTTAAACATCCTGAAGCAGCCATTGGCATTTCCCAGAATTGCAGCTAGCAGCAGCAAGGAATATGAAGAAATGGTGAGAGTTCAAGACCTGATAAGCAAACTATTAGTGAAGAATCCCAAGAAGAGAATTGGAAGTTTCACGGGTTCTGTTGAAATTAAGAGGCATGAGTTCTTCAGAGGTGTTAATTGGGCTTTGATTAGATCAATAAGACCACCTGAGGTTCCTGCTGATATGAACAAGATTAGAAGTAGCAGTAACAAAGTTTTGTTACCAAAACTAAGCAAGAAGGATAGAGATCAACCCTATCGGATTACTCATAATTTTGACTACTTCTAA 1542 0.4676 MATSKAIARDESDYDSSSSSLTTLPESSRSWMTNLSFSSRRRSSSVSVCSSTTTDTTTTSSLYLSSHAKPHKANQAAWEAMSRLRRDSNGHLGLHHFRLLRRLGGGDLGNVYLCQIRNPLVVGSKQSLYAMKVVDREALSVRNKLQRAQMEKEILGMLDHPFLPTLYAEFDASHYSCLVMEFCPGGDLYASRQRQPGKRFSIQSTKFYAAETLLAMEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKSSFKNTPRGSSSSTTAHPACAAPMQSCFSSASFRSKSKRENRVITIIRENAGVQKQQEQKEDEGEEDVDDEEDDEPELVAEPINAKSMSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNSKTLLNILKQPLAFPRIAASSSKEYEEMVRVQDLISKLLVKNPKKRIGSFTGSVEIKRHEFFRGVNWALIRSIRPPEVPADMNKIRSSSNKVLLPKLSKKDRDQPYRITHNFDYF 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00848 513 SMART serkin_6 97 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00848 513 Pfam Protein kinase domain 98 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00848 513 Pfam Protein kinase domain 350 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00848 513 Coils Coil 317 337 - -
Accr12g00848 513 SUPERFAMILY Protein kinase-like (PK-like) 81 478 IPR011009 -
Accr12g00848 513 CDD STKc_phototropin_like 95 478 - -
Accr12g00848 513 MobiDBLite consensus disorder prediction 46 68 - -
Accr12g00848 513 MobiDBLite consensus disorder prediction 325 339 - -
Accr12g00848 513 FunFam protein kinase PINOID 183 251 - -
Accr12g00848 513 MobiDBLite consensus disorder prediction 310 339 - -
Accr12g00848 513 FunFam serine/threonine-protein kinase D6PK-like 348 478 - -
Accr12g00848 513 Gene3D Phosphorylase Kinase; domain 1 95 182 - -
Accr12g00848 513 PANTHER FLIPPASE KINASE 1-RELATED 28 482 - -
Accr12g00848 513 Gene3D Transferase(Phosphotransferase) domain 1 183 252 - -
Accr12g00848 513 Gene3D Transferase(Phosphotransferase) domain 1 348 478 - -
Accr12g00848 513 FunFam protein kinase PINOID 2 95 182 - -
Accr12g00848 513 ProSiteProfiles Protein kinase domain profile. 97 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00848 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Accr12g00848 513 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00848 Accr-Chr12 8520594 8522246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00848 1 513 AGC Kinase Gene Family AT2G26700 56.434 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Accr12g00848 Pkinase 5.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00848 K08286 - gmx:100777988 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00848 12 8520594 8522246 Accr12g00848 12 8520594 8522246 ECH