Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00834 ATGAGGGAGATACAAGTGACAACAGAAGCCAACCATTTCAGTCTGTCTACAGGAATATTGCCTTCTCTTGGAGCCACCAATACCCCCAGAATCAGACTCAAGACCTGCGTTTTATCTCCTTATGATCCTCGTTACAGGTGGTGGGTGAACTTTCTAGTGCTTCTGGTGGTGTACACTGCATGGGTATCGCCATTTGAGTTCGGCTTCCTGGATAAGCCAATACGGTTCATCGCGATCACAGACAATGTTGTGAATGGATTCTTTGCTCTGGATATTGGTCTCACCTTCTTTGTCGCCTACATTGACAAAATCACCTACCTCATGGTTGAAGATCGCAAAGCCATTTTCTTGAGATATGTCAAGACATGGTTCTTCTTCGATTTCATCTCCATTATTCCTTCGGAGCTCGCTCGTCAAGTTCCAGTCCCACCATTTCAATCCTATGGAAATTTCAACATGCTTCGACTTTGGCGACTTCGTAGAATCAGTTCCCTGTTTGCTAGACTGGAGAAGGACATACACTATAACTATTGCTTGGTTCGGAGTACTAAACTTACCTGTGCCACCCTCTTCTACGTTCACTTAGGCGGATGCATCTTCTATTTTATTGCTGCACACTATCCTGAGCCTCAACATACGTGGGTTTGGTTATCGTTGGAAAACTTCCATCAAGAGAGCTTGTTTACAAAATATTTGTACTCTATGTATTGGTCTGCCACTACTTTAACAACTGTTGGTTATGGTGATCTGCATCCAGTGAATACGATAGAGATGCTCTTTAACATCGGTTTCATGCTCTTGAATCTGGCGTTGACGTCTTATTTGATTGGTAACATTAGCAACTTAGTTGTCCATGTCACAAGTCGAACCAGAAGATTCAGGGATACCATACAAGCTGCCACAAATTTTGCGGAAAGGAACCATTTGCCCGTTCGTCTGAAAGATCAGATGCTTGAACACATGTGTTTGAGGTTCAGAACAGATTCAGAGGGATTGCAGCATCACGAGAGCCTTGAAACTCTTCCTAAAGCCATCAGGTCAAGCATTTCACGTAATCTTTTTTCCTCTGTGGTGGATGATGTCTACCTTTTTTCCGGAGTTTCAAAGAACTTGATTTTTCAACTGGTAACAGAGACGAAAGCAGAGTATTTCCCCCCAAAAGAAGATGTTATCTTGCAGAACGAAGAACCAACTGACCTTTATATAATAGTCACTGGTGTTGTGGACATGCTAGTTGTCAAAAATGGAGTTGAAGAGGTCGTAGGCGAGGCCAAAGCTGGTGATGTCATTGGCGAGATCGGAGTTCTTTGCTATAGACTACAACCCTTTACCGTTCGAACCAAGCGATTGTGCCAGCTACTGAGGCTGAACCGCACTACATTTTTAAATGCTATTCATTCCAACGTTGGAGATGGGAACATAATAATGAATAATCTCCTTCAGCATTTGAAAGAGCTTAAGGACCCATTTATGGACGGAATTCTAGTGACTACAGAGAACTTGCTAGCTAGTGGTAGGGTGAACCTACCACTGAGTCTCTCCTTTGCCGCATTAAGAGGAGATGACTGGTTGCTGCATCAGTTGTTGAATCGGGGCTTGGATCCAAATGAATCCGACAACAAAGGAAGGACTGCTTTGCATATAGCAGCTTGCAAAGGAAGCTTGGACAATGTCATGGTTCTTTTGGACCATGGGGCATATCCAAACATTAGAGATTATGATGGTAATGTGCCATTATGGGAGGCTATAGTGGGTGGACACGAGTCAGTGAGCAAGCTGTTAGTAGAAAACGGTGCTAACTTAGAATGTGGAGATGTGGGTCGATTTGCATGCATTGCTGCTGAGCAGAATAATCTGAACTTGCTCAAGGATATATTGAAACATGGAGGAGATGTATCCCTTCCTAGGCATTATGATGGGATCACAGCATTACATATTGCAGTCTGTGAAGGCAATATTGAGATTGTCAAGTTCCTTTTGGAACAAGGCGCCGACGTTGATCAACCAGACAGGAATGGTTGGAAGCCAAGAGCTCTAGCAGATCAACAAGGACATGAGGAGATTAAGGCCATATTTCAGTCTATCGTGGAACCGAAGGCTCCAATACCGGCCAATTCGACTCCTGAGAGATATGTTGGAAGAATTGCAAGAACTGGGAGGAACCATGGACATCACCAAGCAAGAGTAACAATTAGTTGCCCTGAAAAGTCTGATATTGCAGGGAAAATTGTGCTTCTACCGGGGAGCTTTAAGGATCTACTTGAGATTGGAGCTAATAGATATGGTATCAATGCCTCTAGAATTCTGAGCAAAGATGGAGCTGAAATTGATGATCTTGATGTGATTAGAGATGGTGATCTTCTTTTGTTTGTCAGTTCTGAAAAGATATTCAAATCTGCTTTCTCTACTTTTGGTGGTTTGTAA 2424 0.4307 MREIQVTTEANHFSLSTGILPSLGATNTPRIRLKTCVLSPYDPRYRWWVNFLVLLVVYTAWVSPFEFGFLDKPIRFIAITDNVVNGFFALDIGLTFFVAYIDKITYLMVEDRKAIFLRYVKTWFFFDFISIIPSELARQVPVPPFQSYGNFNMLRLWRLRRISSLFARLEKDIHYNYCLVRSTKLTCATLFYVHLGGCIFYFIAAHYPEPQHTWVWLSLENFHQESLFTKYLYSMYWSATTLTTVGYGDLHPVNTIEMLFNIGFMLLNLALTSYLIGNISNLVVHVTSRTRRFRDTIQAATNFAERNHLPVRLKDQMLEHMCLRFRTDSEGLQHHESLETLPKAIRSSISRNLFSSVVDDVYLFSGVSKNLIFQLVTETKAEYFPPKEDVILQNEEPTDLYIIVTGVVDMLVVKNGVEEVVGEAKAGDVIGEIGVLCYRLQPFTVRTKRLCQLLRLNRTTFLNAIHSNVGDGNIIMNNLLQHLKELKDPFMDGILVTTENLLASGRVNLPLSLSFAALRGDDWLLHQLLNRGLDPNESDNKGRTALHIAACKGSLDNVMVLLDHGAYPNIRDYDGNVPLWEAIVGGHESVSKLLVENGANLECGDVGRFACIAAEQNNLNLLKDILKHGGDVSLPRHYDGITALHIAVCEGNIEIVKFLLEQGADVDQPDRNGWKPRALADQQGHEEIKAIFQSIVEPKAPIPANSTPERYVGRIARTGRNHGHHQARVTISCPEKSDIAGKIVLLPGSFKDLLEIGANRYGINASRILSKDGAEIDDLDVIRDGDLLLFVSSEKIFKSAFSTFGGL 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00834 807 Gene3D Jelly Rolls 328 488 IPR014710 -
Accr12g00834 807 PRINTS Ankyrin repeat signature 542 557 IPR002110 GO:0005515
Accr12g00834 807 PRINTS Ankyrin repeat signature 655 669 IPR002110 GO:0005515
Accr12g00834 807 SUPERFAMILY cAMP-binding domain-like 288 483 IPR018490 -
Accr12g00834 807 Pfam KHA, dimerisation domain of potassium ion channel 728 790 IPR021789 -
Accr12g00834 807 ProSiteProfiles cAMP/cGMP binding motif profile. 363 482 IPR000595 -
Accr12g00834 807 FunFam Potassium channel KAT3 47 285 - -
Accr12g00834 807 Gene3D - 510 694 IPR036770 -
Accr12g00834 807 Pfam Cyclic nucleotide-binding domain 383 467 IPR000595 -
Accr12g00834 807 ProSiteProfiles Ankyrin repeat profile. 639 671 IPR002110 GO:0005515
Accr12g00834 807 ProSiteProfiles KHA domain profile. 728 807 IPR021789 -
Accr12g00834 807 PRINTS EAG/ELK/ERG potassium channel family signature 257 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g00834 807 PRINTS EAG/ELK/ERG potassium channel family signature 275 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g00834 807 PRINTS EAG/ELK/ERG potassium channel family signature 231 248 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g00834 807 PRINTS EAG/ELK/ERG potassium channel family signature 81 91 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g00834 807 PRINTS EAG/ELK/ERG potassium channel family signature 58 65 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr12g00834 807 SMART ANK_2a 541 570 IPR002110 GO:0005515
Accr12g00834 807 SMART ANK_2a 574 603 IPR002110 GO:0005515
Accr12g00834 807 SMART ANK_2a 639 668 IPR002110 GO:0005515
Accr12g00834 807 SMART ANK_2a 508 537 IPR002110 GO:0005515
Accr12g00834 807 SMART ANK_2a 605 634 IPR002110 GO:0005515
Accr12g00834 807 Pfam Ion transport protein 46 290 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr12g00834 807 CDD CAP_ED 363 468 IPR000595 -
Accr12g00834 807 ProSiteProfiles Ankyrin repeat region circular profile. 574 602 - -
Accr12g00834 807 Gene3D - 45 286 - -
Accr12g00834 807 ProSiteProfiles Ankyrin repeat profile. 574 606 IPR002110 GO:0005515
Accr12g00834 807 ProSiteProfiles Ankyrin repeat profile. 541 573 IPR002110 GO:0005515
Accr12g00834 807 SMART cnmp_10 363 480 IPR000595 -
Accr12g00834 807 Pfam Ankyrin repeats (3 copies) 612 688 IPR002110 GO:0005515
Accr12g00834 807 Pfam Ankyrin repeats (3 copies) 513 603 IPR002110 GO:0005515
Accr12g00834 807 SUPERFAMILY Ankyrin repeat 475 693 IPR036770 -
Accr12g00834 807 PANTHER POTASSIUM CHANNEL AKT1 11 792 IPR045319 GO:0005249|GO:0006813
Accr12g00834 807 ProSiteProfiles Ankyrin repeat region circular profile. 541 572 - -
Accr12g00834 807 ProSiteProfiles Ankyrin repeat region circular profile. 639 671 - -
Accr12g00834 807 SUPERFAMILY Voltage-gated potassium channels 40 284 - -
Accr12g00834 807 FunFam Potassium channel KAT2 351 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00834 Accr-Chr12 8398225 8402132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00834 11 790 Ion Channels AT2G25600 55.582 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00834 K21867 - zju:107432387 1031.94