Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00826 ATGAAGGACCCAGAAGAAGATCAAATTATTAAATCCAGAAAGGCTATGCAGAAACACACTACGGATCGCAGAAGAAGAGGTAGGAGAAGAAGCCATTGCAATAAACCCGAGATATTAAAAGAAAAAGGGGTTGATTTAGAACTGATCAATCCTTATGCTGCTGCTTCTTGCAATAATAATAGCCTTGAGTTCACCCACAGGCCTGGCTATGGCCAGCTTGGGACAAAGTGTGTGGTCAAGGCGAACCACTTTCTTGCAGATATATCTGCATCTGACTTGAGCCATTACAGTGTTAAGATAACACCTGAAGTTACTTCCCGTAAAATAAGCAAAGCTATTATTGCTGAGTTGGTGAGACTTCATAGAAACACAGACTTGGGTATGAGGCTCCCTGTTTATGATGGAGGAAGGAATCTTTACACTGCCGGTTTGCTTCCTTTTACACACAAGGAATTCACCATTACATTGACTGAAGAAGATGAGGGTACAGGCAATACCTGGGAAAGAGAGTTTAGAGTGAAAATAAAGTTTGCGACTCGTGTTAGCATGCATCAACTACGGGAACTTCTCAGTGGGAAACAAGTGAACACTCCACAAGAAGCACTTAACATCATTGATATTGTATTAAAGGAACTTGCAGCTCAAAGTTACGTGTCAGTCGGAAGGTTTCTCTATTCTGCTGATATAAAAAAACCACAGCAGCTAGGTGGTGGGCTGGAATCATGGCGTGGCTTCTACCAGAGTATAAGGCCTACTCAGATGGGATTGTCTCTTAACATTGACATGTCATCAAAGGCGTTTATTGAACCACTCCCTGTCATTGATTTTGTTGCTCAAATTCTGGGAAAAGACGTGCATTCAAAACCATTGTCAGATGCAGATCGTGTCAAGATTAAAAAAGCCTTAAGAGGCGTGAAAGTTGAAGTTACACACAGAGTAAATGTTAGAAGGAAGTACAGGATTTCAGGACTGACATCACAGCCAACAAGAGAGCTTATATTCCCTCTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTACTTCCGGGAGATGTATGGTTATACAATTAAGTATTCTCATCTACCATGCCTGCAAGTAGGGAATGAAAAGAAGGTCAATTATTTGCCAATGGAGGCGTGCAAGATAGTTGGGGGCCAGAGATATACAAAAGGGCTAAATGAGAAACAGATAACTTCTCTGCTTAAAGTTTCATGCCAAAGACCCCGTGAACAAGAGCTAGACATTCTACAGACAGTTGAACAAAATGATTATGAGAATAATCCCTATGCAAAAGAGTTTGGTATCAGCATAGATGACAAGCTCACATCGGTTGAAGGTCGGGTTCTGCCTGCTCCATGGTTGAAATATCATGATACAGGAAGGGAGAAAGAGTACTTGCCGCAAGTTGGCCAGTGGAATATGATGAACAAGAAAGTTATAAACGGAAGCATAGTAAGATACTGGGCATGCATCAATTTCTCACGTAGTGTTCAAGAAAGCACAGCTCGTGGTTTTTGCCAACAGTTGGTTCAGATGTGCCAAATCTCAGGCATGGAATTCAGTCAGGAGCCAGTAATTCCTATATATTCAGCAAGACCAGATCAGGTTAAAAAGGCCTTGAAATATGTACACTCTGCTGCTTTTGACAAACTTGAAGGCAAAGAACTAGAATTGCTCGTTGCTATTCTTCCAGACAATAATGGCTCTCTGTACGGTGATCTCAAAAGGATCTGTGAAACAGATCTGGGGTTGATTTCTCAGTGCTGCCTTACAAAACACGTTTTCAAGGTTAATAGACAATATCTGGCAAATGTGGCACTTAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTGCTTTTGGATGCATTGAGTTGGAGAATTCCATTGGTTAGTGACATTCCAACAATAATATTTGGAGCTGATGTAACTCATCCAGAATCAGGAGAGGATTCTTCTCCATCCATTGCTGCTGTTGTAGCTTCACAGGACTGGCCTGAAGTAACAAAGTATGCAGGACTTGTGTGTGCTCAGCCTCATCGCGAAGAACTCATTCAAGATCTTTTCAAGTGTTGGAAAGATCCTCAGCGTGGCGTAGTTTATGGTGGCATGATCAGAGAGCTCTTACTCTCATTTAAGAAGGCTACTGGACAAAAGCCGTTGAGGATAATATTTTACAGGGATGGGGTAAGTGAAGGACAATTCTACCAGGTTTTGTTGTATGAACTTGATGCGATCCGCAAGGCTTGTGCCTCACTGGAACCTAGTTACCAACCTCCAGTAACATTTGTTGTGGTTCAAAAGCGGCATCACACTCGACTCTTCTCAAGCAATCACGACGACAGAAATAGCATTGACAGGAGTGGCAACATCTTACCAGGAACCGTGGTGGATTCTAAGATCTGTCATCCCACGGAATTTGACTTTTATTTATGCAGTCATGCAGGAATACAGGGCACGAGTAGACCAGCTCACTATCATGTTCTCTGGGATGAGAACAAATTCACTGCAGACGAGATTCAATCCTTAACCAACAACTTATGCTACACGTATGCAAGATGCACGAGATCTGTTTCCGTAGTGCCTCCAGCATACTATGCTCATCTAGCAGCTTACAGGGCTCGATTCTACATGGAACCTGATATGCATGAGAATGCTAAAGCACGCGGTGGTGGGGCAAGATCAAAGGATGGTTCGGTTCGGCCATTGCCGGCTTTGAAGGAGAAGGTGAAGAATGTAATGTTCTACTGTTGA 2757 0.4244 MKDPEEDQIIKSRKAMQKHTTDRRRRGRRRSHCNKPEILKEKGVDLELINPYAAASCNNNSLEFTHRPGYGQLGTKCVVKANHFLADISASDLSHYSVKITPEVTSRKISKAIIAELVRLHRNTDLGMRLPVYDGGRNLYTAGLLPFTHKEFTITLTEEDEGTGNTWEREFRVKIKFATRVSMHQLRELLSGKQVNTPQEALNIIDIVLKELAAQSYVSVGRFLYSADIKKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSKAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRVNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFREMYGYTIKYSHLPCLQVGNEKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQELDILQTVEQNDYENNPYAKEFGISIDDKLTSVEGRVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSIVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQEPVIPIYSARPDQVKKALKYVHSAAFDKLEGKELELLVAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKVNRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPQRGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSSNHDDRNSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDMHENAKARGGGARSKDGSVRPLPALKEKVKNVMFYC 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00826 918 Pfam N-terminal domain of argonaute 75 209 IPR032474 -
Accr12g00826 918 Gene3D - 628 918 IPR036397 GO:0003676
Accr12g00826 918 ProSiteProfiles PAZ domain profile. 271 385 IPR003100 GO:0005515
Accr12g00826 918 Pfam PAZ domain 275 401 IPR003100 GO:0005515
Accr12g00826 918 Pfam Mid domain of argonaute 468 545 IPR032473 -
Accr12g00826 918 SMART Piwi_a_2 559 880 IPR003165 GO:0003676
Accr12g00826 918 MobiDBLite consensus disorder prediction 1 33 - -
Accr12g00826 918 FunFam Argonaute 10 449 622 - -
Accr12g00826 918 ProSiteProfiles Piwi domain profile. 559 880 IPR003165 GO:0003676
Accr12g00826 918 CDD PAZ_argonaute_like 270 384 - -
Accr12g00826 918 Pfam Argonaute linker 1 domain 219 268 IPR014811 -
Accr12g00826 918 SMART PAZ_2_a_3 275 407 IPR003100 GO:0005515
Accr12g00826 918 MobiDBLite consensus disorder prediction 17 33 - -
Accr12g00826 918 Gene3D paz domain 265 389 - -
Accr12g00826 918 SMART DUF1785_2 218 270 IPR014811 -
Accr12g00826 918 Pfam Argonaute linker 2 domain 415 457 IPR032472 -
Accr12g00826 918 SUPERFAMILY Ribonuclease H-like 548 881 IPR012337 -
Accr12g00826 918 Pfam Piwi domain 560 879 IPR003165 GO:0003676
Accr12g00826 918 SUPERFAMILY PAZ domain 266 425 IPR036085 GO:0005515
Accr12g00826 918 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 63 881 - -
Accr12g00826 918 FunFam protein argonaute 10-like 628 918 - -
Accr12g00826 918 MobiDBLite consensus disorder prediction 1 16 - -
Accr12g00826 918 CDD Piwi_ago-like 429 879 IPR045246 -
Accr12g00826 918 Gene3D - 449 622 - -
Accr12g00826 918 FunFam Protein argonaute-2 264 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00826 Accr-Chr12 8325250 8330248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00826 64 918 Eukaryotic Initiation Factors Gene Family AT5G43810 75.261 0.0 1396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00826 K11593 - gmx:100808457 1599.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00826 12 8325250 8330248 Accr12g00826 12 8325250 8330248 ECH