Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00822 ATGGCCGACTGTTTTTACTCTTGGCGTTTGATCATTGTCTTCTTCGTCGTCTCTCTTCTTCTCCTGCGAGTCAGTACGGAGCCGACTCAGGACAAGCAAGCCCTCCTTGCCTTCATATCTCAGACCCCACACGCCAATCGCGTCCAATGGAACGCTTCCAACTCAGCCTGCAACTGGTTTGGCGTTGAATGCGGCGCTTCTCGTTCCTTCGTCTTCTCTCTTCGTCTTCCCGGCGTTGGTCTTGTGGGTCCAATTCCTCCCAACACAATCGGTCGTCTTACTCAGCTTCGAGTTCTGAGTCTCCACTCGAATGGTCTCTCCGGCGAGATCCCTGCCGATTTCTCTAATTTGACGTTGCTTCGGAACTTGTATCTCCAGGATAACCAGTTCTCCGGTGGGTTTCCTCCCTCTCTGACTCAGTTGGGTCGGTTGACTCGCTTGGATCTCTCGTCCAACAATTTTACCGGTCCAATCCCTTTCTCAATCAACAATTTGACCCACTTGACTGGTCTATTTTTGCAAAGCAATAAGTTCTCGGGCAATCTACCAAGCGTGAGCGCCAAATTGGTGGGATTCAACGTTTCTAACAATCAGCTCAATGGTTCGATCCCCAAATCTCTCTCGAATTTCTCTGCATCCTCATTCGCCGGGAACTTAAATCTCTGCGGCGGACCATTGCCGCCATGTACCCCATTCTTTCCGTCTCCGGCTCCGCAGCCTTCGGCCCCCGTGGAACCCCCTTCCCCAGTTCAGAAAAAGTCCAAGAAGCTCTCAAAAGCCGCCATTATCGGAATTGCAGTCGGGTGTTCTCTTGCGGCCTTGTTACTCCTCCTGCTCCTGCTCCTGCTATGCCTAGGAAAACGCCGGCGAAGCCAGCCAGCGAAACCGCCGAAGCCCGTGGTGGCGGCACGTGCTGCGCCGGCGGAGGCCGGAACATCGTCCTCAAAAGACGATATCACCGGTGGGTCGGTGGAGGCAGAGAGGAACAAGCTGGTGTTCTTCGAAGGCGGGATATACAGCTTCGATTTGGAAGATCTGTTGAGAGCTTCCGCCGAAGTTCTGGGCAAAGGAAGCGTGGGAACTTCCTACAAGGCAGTGCTGGAAGAAGGAACTACAGTGGTGGTAAAGAGATTAAAAGACGTGACCGTAACAAAGAAAGACTTCGATGCTCAAATGGATGTTCTGGGCAAGATTAAACACGAGAATGTGGTTCCTCTTAGAGCTTACTATTTCTCTAAGGATGAGAAATTGCTCGTCTACGATTACCTCCCATCTGGTAGCTTGTCGGCCCTGCTTCACGGGAGCAGGGGGTCAGGGAGGACGCCACTTGACTGGGATAACCGAATGAGAATAGCGCTTGGTGCCGCCAGGGGGTTGCTTCACCTACACGTGTCGGGAAAAGTGGTCCACGGCAACATCAAAGCGTCCAACGTACTCCTCAGAGGAAGCGACAACGAGGCCTGCGTTTCGGACTTCGGGCTCAACCCGTTGTTCGCTAACACCACTCCCTCCAACCGGGTTGCGGGCTACAAGGCACCCGAAGTGCTCGAAACCCGGAAAGTCACTTTTAAATCCGACGTGTACAGCCTCGGAGTTTTGCTGCTGGAGCTCCTCACCGGGAAGGCGCCGAACCAGGCGTCGCTGGGGGAGGAGGGGATTGACCTTCCGAGATGGGTTCAGTCGGTGGTCCGGGAGGAATGGACGGCGGAGGTGTTCGACGCGGAGCTCATGAGGTACCACAATATAGAGGAAGAGATGGTTCAGTTGTTGCAGATAGCCATGGCGTGCGTTTCAGTGGTTCCAGATCAGAGACCGACCATGCAGGAGGTGGTTCGGATGATGGAGGAGATCAATAGGAGCGAGACGGACGAGGGGTTGCGGCAGTCATCGGACGATCCATCGAAGGGATCGGACGGTCAAACGCCGCCGGCCGAGTCAAGGACTCCACCCAGATCAATCACACCTTAA 1968 0.5427 MADCFYSWRLIIVFFVVSLLLLRVSTEPTQDKQALLAFISQTPHANRVQWNASNSACNWFGVECGASRSFVFSLRLPGVGLVGPIPPNTIGRLTQLRVLSLHSNGLSGEIPADFSNLTLLRNLYLQDNQFSGGFPPSLTQLGRLTRLDLSSNNFTGPIPFSINNLTHLTGLFLQSNKFSGNLPSVSAKLVGFNVSNNQLNGSIPKSLSNFSASSFAGNLNLCGGPLPPCTPFFPSPAPQPSAPVEPPSPVQKKSKKLSKAAIIGIAVGCSLAALLLLLLLLLLCLGKRRRSQPAKPPKPVVAARAAPAEAGTSSSKDDITGGSVEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVTVTKKDFDAQMDVLGKIKHENVVPLRAYYFSKDEKLLVYDYLPSGSLSALLHGSRGSGRTPLDWDNRMRIALGAARGLLHLHVSGKVVHGNIKASNVLLRGSDNEACVSDFGLNPLFANTTPSNRVAGYKAPEVLETRKVTFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVVPDQRPTMQEVVRMMEEINRSETDEGLRQSSDDPSKGSDGQTPPAESRTPPRSITP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00822 655 Gene3D Transferase(Phosphotransferase) domain 1 423 637 - -
Accr12g00822 655 Pfam Protein kinase domain 351 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00822 655 MobiDBLite consensus disorder prediction 290 321 - -
Accr12g00822 655 MobiDBLite consensus disorder prediction 616 655 - -
Accr12g00822 655 SUPERFAMILY L domain-like 31 213 - -
Accr12g00822 655 MobiDBLite consensus disorder prediction 616 631 - -
Accr12g00822 655 PANTHER OS05G0588300 PROTEIN 13 627 - -
Accr12g00822 655 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 628 - -
Accr12g00822 655 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Accr12g00822 655 SUPERFAMILY Protein kinase-like (PK-like) 352 615 IPR011009 -
Accr12g00822 655 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Accr12g00822 655 Gene3D Phosphorylase Kinase; domain 1 316 422 - -
Accr12g00822 655 Gene3D Ribonuclease Inhibitor 187 232 IPR032675 -
Accr12g00822 655 FunFam Probable inactive receptor kinase RLK902 28 186 - -
Accr12g00822 655 FunFam pollen receptor-like kinase 1 318 422 - -
Accr12g00822 655 MobiDBLite consensus disorder prediction 632 655 - -
Accr12g00822 655 ProSiteProfiles Protein kinase domain profile. 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00822 Accr-Chr12 8262719 8265448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00822 5 638 Receptor kinase-like Gene Family AT5G58300 53.583 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr12g00822 Pkinase 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00822 - - pvy:116116987 919.072