Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00803 ATGTTTCCTTCAAACCCTTTTCCCTTTGACAGCAACCTAAACTCCACGCAACAACAAAGCCTTCTTCCTCCTGCTCCTTCTTTCTCCTTTCTTCACTTTCCTCCACCTTCCTTTGAAGACAATGAAATCTTTCTTCCTCAACCACCAAACCACCACCATGACCATCTCTTACCCAATCATCATCAATCACAACCTCTAGCTGAAGCTGCAGGCATGGCGATTCCGAGCAAGAACGAGCAGATCCCGGCAACGATGCGGAATAAGAGGATTTGCAAGAGAGATAGGCACAGCAAGATCAAGACGGCTAAAGGGCTAAGGGATCGGAGAATGAGACTTTCTTTGGAAGTAGCTAAGAGATTCTTTGGTCTTCAAGACATTCTAGGCTTTGACAAGGCCAGCAAAACCGTTGAGTGGTTACTGAATCAGTCAAAGGATGAGATCAAACAGCTTGCAATAGACAAGAATTACAATAATTATTGCAGTGGGATCAGTGGTGGGGTAGTGAAGAGTGCATCTTCAACTTCAGAGTGTGAAGGGGTTTCAGGTTTAGACGATGTGGCATTAAGTGGAATGAATCAAGAACAAGAGGGAGATCAACAACGACCCTTACTGGTAACGAAGAGAAGGACAAGAAATGCAAGAAAGAGTGCACTTTTATTGGATCCTCTAATTGCAAGAGAGTCAAGGGAAAAAGCTAGAGAGAGGGCAAGAGAGAGAACCAAGCAGAAGCAGAAAATGAAGATGAAAGGAGAAAAGGTGAATAATCCTACCGTAGGGGTCAATATGGCTGAGGCTGCTGAAGACGAACCAAGTTCTCAGGCAAACGAAGATGATGATTCCTTGGCGGTTAACATGATATTCAACTCATTGAATACTTCATCTACAGTCGTACAAGATCATCATCAATTTGTGGAATTTCAGTCCTTGGCAAAACTTTGGGAGGCCTGCTACAATCACATGATCTAA 966 0.4358 MFPSNPFPFDSNLNSTQQQSLLPPAPSFSFLHFPPPSFEDNEIFLPQPPNHHHDHLLPNHHQSQPLAEAAGMAIPSKNEQIPATMRNKRICKRDRHSKIKTAKGLRDRRMRLSLEVAKRFFGLQDILGFDKASKTVEWLLNQSKDEIKQLAIDKNYNNYCSGISGGVVKSASSTSECEGVSGLDDVALSGMNQEQEGDQQRPLLVTKRRTRNARKSALLLDPLIARESREKARERARERTKQKQKMKMKGEKVNNPTVGVNMAEAAEDEPSSQANEDDDSLAVNMIFNSLNTSSTVVQDHHQFVEFQSLAKLWEACYNHMI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00803 321 MobiDBLite consensus disorder prediction 1 21 - -
Accr12g00803 321 Pfam TCP family transcription factor 92 247 IPR017887 -
Accr12g00803 321 ProSiteProfiles R domain profile. 226 243 IPR017888 -
Accr12g00803 321 ProSiteProfiles TCP domain profile. 92 150 IPR017887 -
Accr12g00803 321 MobiDBLite consensus disorder prediction 228 250 - -
Accr12g00803 321 Coils Coil 229 249 - -
Accr12g00803 321 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 62 288 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00803 Accr-Chr12 8091116 8092417 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00803 80 250 TCP Transcription Factor Family AT3G18550 44.751 7.93e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr12g00803 TCP 3.2e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00803 - - vra:106767828 194.897