Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00792 ATGCTTGATGGTGTTTACCGGGAGAAGGAAGCGAAAGATATACCAATTCCAAACATTAAATGGGTTGTCTTTGAATTGATGATGATATTTATTTATACTGGAACTGTAGATGTCAATTTGGATCTTGCTCAGGATCTTTTGAGAGCTGCTGATCAGTATCTTCTGGATGAACTTAAGGAATCCTGTGAATGTGTAATAGCTAAGGATATTTTCTTGGAAAATGTTTCTCAATTGTATGAGTTCTCAGAGTCAATGAATGCTATGTCATTGAAGCGAGCATGTATATTCTTTTTGTTGGAGCAATTTGACAAATTGAGGTTAAAACCATGGTATAGCCGCCTGATGTGTCGCATTGCCCCAGATGTAATCGAATTTTTCAGAAGTTTACTTGCCAGTGGAATAGATAAGAAATAA 414 0.3623 MLDGVYREKEAKDIPIPNIKWVVFELMMIFIYTGTVDVNLDLAQDLLRAADQYLLDELKESCECVIAKDIFLENVSQLYEFSESMNAMSLKRACIFFLLEQFDKLRLKPWYSRLMCRIAPDVIEFFRSLLASGIDKK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00792 137 Gene3D Potassium Channel Kv1.1; Chain A 1 106 IPR011333 -
Accr12g00792 137 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 132 IPR044282 -
Accr12g00792 137 Pfam BTB/POZ domain 7 66 IPR000210 GO:0005515
Accr12g00792 137 SUPERFAMILY POZ domain 4 67 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00792 Accr-Chr12 7914842 7915658 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr12g00792 BTB 4.3e-10 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00792 - - cave:132170996 169.088