Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00770 ATGGCACCACAAGATACTGTCTCTAGTGTTGAAATGCCCCAGAAAACTTCTGGTCTGCTGCGGGATCAGGTTCAGCTGGTAAAAAGAAAGGACTCTGATCGCTATGAAATTGTCTCAATCCCAGATTCCCTCTCATTTGAGAAAGGTTTCTTCATAGTTATTCGTGCATGCCAATTGCTGGCTCAAAAGAATGATGGGTTAATATTAGTAGGAGTTGCTGGACCCTCTGGAGCTGGGAAGACAGTTTTCACTGATAAGGTCCTCAACTTCATGCCAAGCGTTGCTGTCATAACAATGGACAACTATAATGATTCTAGCCGAGTCATAGATGGCAACTTTGATGACCCTCGGCTGACAGATTATGATACATTGCTCGAAAATATACAGGGTCTCAAAGCTGGCAAGCCAGTTCAGGTTCCAATATATGATTTCAAGTCTAGCTCTCGCATAGGCTACAGGACTGTTGAAGTCCCTAGCTCCCGTATTGTCATTGTAGAAGGCATCTATGCCTTGAGTGAAAAATTGCGCCCTTTGCTAGATCTTCGGGTGTCCGTCACTGGAGGAGTACACTTTGACCTTGTCAAGCGGGTCTTGCGGGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATTTCTGAAACGGTATACCCAATGTATAAAGCCTTTATTGAGCCAGATCTCCAAACAGCTCATATAAAAATCATCAACAAGTTTAATCCATTCTCTGGATTCCAGAATCCCACTTACATATTGAAGTCAACAAAGGCTGTGACGGAGGATCAAATCAAGGCCGTTATTGCTGCAGAGCATACTGAAACCACAGAGGAAACATATGACATATATCTTCTACCACCTGGGGAAGACCCTGAAGCATGTCAATCATACTTGAGGATGAGAAACCGGGATGGGAAGTACAATCTTATGTTTGAGGAATGGGTTACAGACAGTCCGTTCATAATATCTCCTAGAATTACTTTTGAGGTTAGTGTACGCCTTCTGGGGGGGCTGATGGCCTTGGGGTACACAATTGCTGCTATCCTGAAAAGAAACAGCCATATCTTTCATGATGATAAAGTATCAGTAAAAACTGATTGGTTGGAACAACTTAATCGCCAATATGTTCAGGTACAAGGGAGAGATAGAAACTATGTTAAATGTGTGGCAGAGAAACTGGGGTTGGATGGTTCATATGTTCCTCGCACCTACATTGAACAAATTCAGCTGGAGAAGCTTATAAATGATGTGATGGCGTTGCCAGATGATCTGAAGACCAAACTCAGTATAGATGATGATGTGGTTTTGAGCCCCAAAGAAGCCCTTTCCAGGGCTTCTGCAGATAGGAGGACAAAGTACTTAAATCGCAGTCTGTCACACTCATATTCAAGTCAAAGAGACAAGAGTCTATCTAAGCTGACTAGATTAACTATAAACAACCGACGATTTGATGGACGTGCTCTGGAATCACCTGCAGCAATTGCAAACCAAGGAGTCATTACACAACTTTCTGATCAAATTTCTACATTAAATGAGAGAATGGATGAGTTCACATCCCGCATTGAAGAGCTGAATTCGAAGTTTGCAAACAGAAAAGTTTCCGCCAGTCAGCAGAACTTGGCTTTACAGGCTGAAGCTCGCAATGGTTCGGGACCCACTCCCCTGTTCCTTAATGGGTTGGGTAATGGTTCGTTGACCGGATCGCTGTTGCCTAATTCTTCATCATCTTCCCAACTGGCGAGGGAGTCCCAACTGTTGGAAGAGGTTGTAAACATTGAACGGGGACAACGTCAAATCATGCATCAACTAAATAGTCTGAGCAATCTTTTGCATGAATACTTTGGGGAGAGAGCACGTCTAGGAAGAGCAAACCAGACAAGCAGGATACCTGACTTTGACTTCACCATCCCGCTTGTTCTGACTTTGGCAATTGGTGCTGTCGGCGTATTTCTGTTCAAGGGTTCGACATCTCATAAATAA 1986 0.4345 MAPQDTVSSVEMPQKTSGLLRDQVQLVKRKDSDRYEIVSIPDSLSFEKGFFIVIRACQLLAQKNDGLILVGVAGPSGAGKTVFTDKVLNFMPSVAVITMDNYNDSSRVIDGNFDDPRLTDYDTLLENIQGLKAGKPVQVPIYDFKSSSRIGYRTVEVPSSRIVIVEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSTKAVTEDQIKAVIAAEHTETTEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRNSHIFHDDKVSVKTDWLEQLNRQYVQVQGRDRNYVKCVAEKLGLDGSYVPRTYIEQIQLEKLINDVMALPDDLKTKLSIDDDVVLSPKEALSRASADRRTKYLNRSLSHSYSSQRDKSLSKLTRLTINNRRFDGRALESPAAIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFANRKVSASQQNLALQAEARNGSGPTPLFLNGLGNGSLTGSLLPNSSSSSQLARESQLLEEVVNIERGQRQIMHQLNSLSNLLHEYFGERARLGRANQTSRIPDFDFTIPLVLTLAIGAVGVFLFKGSTSHK 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00770 661 Pfam Phosphoribulokinase / Uridine kinase family 70 238 IPR006083 GO:0005524|GO:0016301
Accr12g00770 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 238 IPR027417 -
Accr12g00770 661 PANTHER URIDINE KINASE 16 425 - -
Accr12g00770 661 Coils Coil 502 529 - -
Accr12g00770 661 Gene3D - 255 415 - -
Accr12g00770 661 ProSiteProfiles CYTH domain profile. 250 412 IPR023577 -
Accr12g00770 661 Pfam CYTH domain 273 406 IPR023577 -
Accr12g00770 661 CDD UMPK_like 69 241 - -
Accr12g00770 661 Gene3D - 68 248 IPR027417 -
Accr12g00770 661 PRINTS Uridine kinase signature 134 149 - -
Accr12g00770 661 PRINTS Uridine kinase signature 67 84 - -
Accr12g00770 661 PRINTS Uridine kinase signature 226 239 - -
Accr12g00770 661 PRINTS Uridine kinase signature 190 200 - -
Accr12g00770 661 SUPERFAMILY CYTH-like phosphatases 263 409 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00770 Accr-Chr12 7560247 7565400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00770 68 238 PRT Gene Family AT5G40870 28.889 1.19e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00770 K00876 - gmx:100803122 1075.85