Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00768 ATGCTGAAAATGGACTATGGTGGTGGCTATACCAGTAATTGGGTACGCCTCTGTGACTCTTGCGGATCCTCTGCTTCCACTCTTTACTGTCACACTGATTCAGAGTACCTCTGTTCTTCATGCGATGGACAAATTCATGCGCTGGGGTCTCCTGGTTGGCCCCACCATCGTGTGAAACTTTGTGGCGCGTGTGAGAACGCTCCGGTGGCTTTCACCTGCAAGGCCGATGATGCTTCGCTGTGTGTCAACTGTGACTTTGAAATTCACTCTGCTAACCCCATCGCTAGCCGACACAAAAGGGTCCCTGTTTCTCCCCTGCCTCACATACTCAACGACAACGTGGAAACTCCGGACAACCAGCCTAATTACGAGGTTATCGACAACAGAAACAACATGAGTAGCAAGGAAATGGACGAACGAGAAGCTGACTCGTGGTTACTGCTTGGTTCTGCTGATACTATAGACAACCAGGTTGGTGATGGGTTTATGATCGGAGAACCAGAGGATAATCACCATGCGTACGTGGGGCTTGTTGAAGAGTGTGATTCATCTACAAAATTCACAACTTTCCACGAAGATCATGATCAGGGGCAACAAACTTACAGCTCCTCTGAAGAGATGAACGAAAGTGACAGTGTTGTGCCAGTTCAATCGGTTGAAGCTGATCAGCCTAAGCAATTGCAGCCTCCTCAGCAGCAGCAGCAGAACATCCACTTCAATATGGAGCAAAAGCCATCATCAAGAGTTTCTTTCACTAATTCCGCCTCGAATTGCCGGAGCGTAAGATGA 789 0.4842 MLKMDYGGGYTSNWVRLCDSCGSSASTLYCHTDSEYLCSSCDGQIHALGSPGWPHHRVKLCGACENAPVAFTCKADDASLCVNCDFEIHSANPIASRHKRVPVSPLPHILNDNVETPDNQPNYEVIDNRNNMSSKEMDEREADSWLLLGSADTIDNQVGDGFMIGEPEDNHHAYVGLVEECDSSTKFTTFHEDHDQGQQTYSSSEEMNESDSVVPVQSVEADQPKQLQPPQQQQQNIHFNMEQKPSSRVSFTNSASNCRSVR 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00768 262 ProSiteProfiles Zinc finger B-box type profile. 56 103 IPR000315 GO:0008270
Accr12g00768 262 Pfam B-box zinc finger 58 103 IPR000315 GO:0008270
Accr12g00768 262 Pfam B-box zinc finger 16 58 IPR000315 GO:0008270
Accr12g00768 262 ProSiteProfiles Zinc finger B-box type profile. 13 60 IPR000315 GO:0008270
Accr12g00768 262 MobiDBLite consensus disorder prediction 192 211 - -
Accr12g00768 262 MobiDBLite consensus disorder prediction 194 211 - -
Accr12g00768 262 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 248 IPR045281 GO:0009909
Accr12g00768 262 MobiDBLite consensus disorder prediction 243 262 - -
Accr12g00768 262 CDD Bbox1_BBX-like 60 103 - -
Accr12g00768 262 SMART bboxneu5 56 103 IPR000315 GO:0008270
Accr12g00768 262 SMART bboxneu5 13 51 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00768 Accr-Chr12 7532538 7533326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00768 11 255 C2C2-CO-like Transcription Factor Family AT3G02380 37.551 7.44e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Accr12g00768 zf-B_box 2.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00768 - K12135 pcin:129321006 397.512