Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00767 ATGCTGAAAATGGACTATGGTGGTGGCTATACCAGTAATTGGGTACGCCTCTGTGACTCTTGCGGATCCTCTGCTTCCACTCTTTACTGTCACACTGATTCAGAGTACCTCTGTTCTTCATGCGATGGACAAATTCATGCGCTGGGGTCTCCTGGTTGGCCCCACCATCGTGTGAAACTTTGTGGCGCGTGTGAGAACGCTCCGGTGGCTTTCACCTGCAAGGCCGATGATGCTTCGCTGTGTGTCAACTGTGACTTTGAAATTCACTCTGCTAACCCCATCGCTAGCCGACACAAAAGGGTCCCTGTTTCTCCCCTGCCTCACATACTCAACGACAACGTGGAAACTCCGGACAACCAGCCTAATTACGAGGTTATCGACAACAGAAACAACATGAGTAGCAAGGAAATGGACGAACGAGAAGCTGACTCGTGGTTACTGCTTGGTTCTGCTGATACTATAGACAACCAGGTTGGTGATGGGTTTATGATCGGAGAACCAGAGGATAATCACCATGCGTACGTGGGGCTTGTTGAAGAGTGTGATTCATCTACAAAATTCACAACTTTCCACGAAGATCATGATCAGGGGCAACAAACTTACAGCTCCTCTGAAGAGATGAACGAAAGTGACAGTGTTGTGCCAGTTCAATCGGTTGAAGCTGATCAGCCTAAGCAATTGCAGCCTCCTCAGCAGCAGCAGCAGAACATCCACTTCAATATGGAGCAAAAGCCATCATCAAGAGTTTCTTTCACTAATTCCGCCTCGAATTGCCGGAGCGTAGCTGTTCCATATATGGTTGCTCAAATGCTGCAGAGAGGGACGATGAGTGAGAAGCCAGGGTACAGATTTCCCCAAGGAACAGAGATATTTCCTAGTGGTTCATCAGTTCCAATGCAAATCCACTTTGGGCAGATGAACAGGAAAGCTGGAGTGGAAAAATACAGAGAGAAGAAGAAATCGAGAAAGTTCGAGAAGAGAATCAGATATGCTTACAGGAAAGCCTATGCTGAGAAACGACCCAGAGTTAAGGGTAGATTTGTTAAGAGACAAGACTTAACCTCAGATGAAGCTGTGCCTCTCCATTGA 1089 0.472 MLKMDYGGGYTSNWVRLCDSCGSSASTLYCHTDSEYLCSSCDGQIHALGSPGWPHHRVKLCGACENAPVAFTCKADDASLCVNCDFEIHSANPIASRHKRVPVSPLPHILNDNVETPDNQPNYEVIDNRNNMSSKEMDEREADSWLLLGSADTIDNQVGDGFMIGEPEDNHHAYVGLVEECDSSTKFTTFHEDHDQGQQTYSSSEEMNESDSVVPVQSVEADQPKQLQPPQQQQQNIHFNMEQKPSSRVSFTNSASNCRSVAVPYMVAQMLQRGTMSEKPGYRFPQGTEIFPSGSSVPMQIHFGQMNRKAGVEKYREKKKSRKFEKRIRYAYRKAYAEKRPRVKGRFVKRQDLTSDEAVPLH 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00767 362 ProSiteProfiles Zinc finger B-box type profile. 56 103 IPR000315 GO:0008270
Accr12g00767 362 MobiDBLite consensus disorder prediction 194 235 - -
Accr12g00767 362 ProSiteProfiles Zinc finger B-box type profile. 13 60 IPR000315 GO:0008270
Accr12g00767 362 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 352 IPR045281 GO:0009909
Accr12g00767 362 Pfam CCT motif 308 350 IPR010402 GO:0005515
Accr12g00767 362 Pfam B-box zinc finger 58 103 IPR000315 GO:0008270
Accr12g00767 362 Pfam B-box zinc finger 16 58 IPR000315 GO:0008270
Accr12g00767 362 MobiDBLite consensus disorder prediction 192 235 - -
Accr12g00767 362 CDD Bbox1_BBX-like 17 58 - -
Accr12g00767 362 CDD Bbox1_BBX-like 60 103 - -
Accr12g00767 362 ProSiteProfiles CCT domain profile. 308 350 IPR010402 GO:0005515
Accr12g00767 362 SMART bboxneu5 56 103 IPR000315 GO:0008270
Accr12g00767 362 SMART bboxneu5 13 51 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00767 Accr-Chr12 7531234 7533326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00767 11 350 C2C2-CO-like Transcription Factor Family AT3G02380 39.420 1.29e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Accr12g00767 zf-B_box 4.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00767 - K12135 pcin:129321006 555.829