Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00760 ATGGAGCTCCCTCAAGCGCGTTCCTTCGGAACCGAAGCAAGAAAACCGACGCATGACTTTCTGTCACTGTACAGTCATTCAACTGCCCAGCAAGATCCAAGACCACCATCTCAAGGAAGTTACCTGAAAACGCATGATTTCTTGCAGCCACTAGAACGTGTTGAGAAGAAAGCAAGCGCCAAAGAAGAAGCATCGGATGAGATATCATCAGTGGTTCAAAAGCCAGCACCACCTGCACCACCGCCACAACCATGTGTTGAGCACATCCTACCTGGAGGCATTGGGACTTACAGTATCAGCCACATTTCGTACTTTAGTAATCACAGGGTTCCAAAGCCGGAGGCTTCCCTTTTCACAGTGTCTCAAGCTTGTGAAGGAAGTTCAGATAGAAATGAGGAGAATTCTAACTGCAGTTCATATTCTGGAAGTGGTTTCTCTTTGTGGGAAGAGTCTGCCGTTAAGAAGGGAAAGACAGGGAAGGAGAATGACGTGGGAGAGAAACCCGTTATAGCAGAGTGTGGGGCCAAGCAGTGGTCGATGACTGAGAGAGCATCTCAGTCATTTGTTAAGAATAATCAGAATAGCTTCAATTCTATCACTTCCACTCAGAAAACTGGGCAGAAGAACCAGAGTTTCATTGATATGATAAAATCCGCCAAGGATTGTTCTCAGGATGAGGAGCTAGACAATGAAGAAGCATTCATTTTTAAGAAAGAATCCTCAAATACCCAGAGAGGCGAATTGAGAGTGAAAGTGGATGGGAAAAGTTCTGATCAAAGGCCAAACACACCACGGTCGAAACATTCTGCAACAGAGCAGCGTAGAAGGAGTAAAATTAATGACAGATTCCAGATGTTGAGAGAGCTTATTCCACAAAGTGACCAGAAAAGAGACAAGGCATCTTTTCTGTTGGAGGTCATTGAGTACATTCAGTTTTTACAAGAAAAGGTTCATAAGCACGAAGGTTCATACCAAGTGTGGAATCAAGAGAAAGAAAAATTGACTCCATGGAGGAATAATCAAAGGCCTTCAGAGAGCTATGATGATCAATCTAGGGTAATAAATAGTGGGTCAGTTCCTTCTTCAATATTACTGTTCCCTTCAAAGATGGAGGAGGAAAATTATAGCATCTCCCCAACAGTCACTGGCGGCACGAAGAATGTAGCTGGTACTAGTTCTGCAACTACATTGAAGGCAATGAATCAACATCCTGGAATAACCAATAAGGCCGTGCCAATTCCTAACTCTTCACAGTCAAATTTCTTCAATCCTGGCCAAAGTGGCGGTCCAGGTAGATTGGCGTCTCAGCTCACACACAGGCTAACCTCAGATGCTGAAAACACCATATATAATCCCTTAGGACTGTCTCAGACTCACTCTTCTGCTACAGGGATGACTGCTGCAAGTGACAAGCTTAAAGAGAAAGATCTCACTATTGAAAGCGGCGCCATTAGCATATCAAGTGTGTACTCAAAAGGGTTGTTGGATTCGCTAACACAAGCACTGAAGAATTCAGGAGTGGATTTGTCACAGGCTAGCATTTCAGTCCAAATTGAGCTTGGTAAGCAAGCAAACATCAGACCAATTGGACCAACTTCTGGGGTTAAGGATGAAGTTACTTCTAGCAACCAAGGGATGAAGCGCTCTAGAGTTTGTAGCGTAGAGGAGACTGACCTAGCAGTAAAGAAGCTAAAGACAACCAGAAGTTGA 1710 0.4404 MELPQARSFGTEARKPTHDFLSLYSHSTAQQDPRPPSQGSYLKTHDFLQPLERVEKKASAKEEASDEISSVVQKPAPPAPPPQPCVEHILPGGIGTYSISHISYFSNHRVPKPEASLFTVSQACEGSSDRNEENSNCSSYSGSGFSLWEESAVKKGKTGKENDVGEKPVIAECGAKQWSMTERASQSFVKNNQNSFNSITSTQKTGQKNQSFIDMIKSAKDCSQDEELDNEEAFIFKKESSNTQRGELRVKVDGKSSDQRPNTPRSKHSATEQRRRSKINDRFQMLRELIPQSDQKRDKASFLLEVIEYIQFLQEKVHKHEGSYQVWNQEKEKLTPWRNNQRPSESYDDQSRVINSGSVPSSILLFPSKMEEENYSISPTVTGGTKNVAGTSSATTLKAMNQHPGITNKAVPIPNSSQSNFFNPGQSGGPGRLASQLTHRLTSDAENTIYNPLGLSQTHSSATGMTAASDKLKEKDLTIESGAISISSVYSKGLLDSLTQALKNSGVDLSQASISVQIELGKQANIRPIGPTSGVKDEVTSSNQGMKRSRVCSVEETDLAVKKLKTTRS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00760 569 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 261 334 IPR036638 GO:0046983
Accr12g00760 569 MobiDBLite consensus disorder prediction 21 44 - -
Accr12g00760 569 FunFam BHLH domain class transcription factor 261 333 - -
Accr12g00760 569 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 566 IPR044295 GO:0003700|GO:0006351|GO:0046983
Accr12g00760 569 MobiDBLite consensus disorder prediction 48 68 - -
Accr12g00760 569 MobiDBLite consensus disorder prediction 1 88 - -
Accr12g00760 569 Pfam Helix-loop-helix DNA-binding domain 265 314 IPR011598 GO:0046983
Accr12g00760 569 MobiDBLite consensus disorder prediction 527 551 - -
Accr12g00760 569 CDD bHLH_AtBIM_like 262 338 - -
Accr12g00760 569 Gene3D - 261 335 IPR036638 GO:0046983
Accr12g00760 569 SMART finulus 269 319 IPR011598 GO:0046983
Accr12g00760 569 MobiDBLite consensus disorder prediction 245 280 - -
Accr12g00760 569 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 263 313 IPR011598 GO:0046983
Accr12g00760 569 MobiDBLite consensus disorder prediction 535 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00760 Accr-Chr12 7395797 7400655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00760 1 566 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 48.136 4.12e-125 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr12g00760 HLH 1.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00760 - - gmx:100808016 675.241