Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00700 ATGTCAGAGCATGTAACAGATTCCTGGGGCTTACTATTAATCTGTTTCTTAATCCTTTTCTCAGCGAGGAAAATAGTTGTTGCTGGAGATTCTCTGGACACAGACACAGAAGTTTTGCTTCAGCTTCAATTATACCTCAACAATCAAACTCTTGTAGACCAAGGAGAATACACAAACTGGAGCAAGAACAGTTCGAATCCGTGTGACTGGTCCGGAATCCGGTGTAGCGGCAATGAAACAACAACGAGGAGGGTGGTCGGAGTTGACCTCTCCGACAACAAAATCACCGGCAAGATATTCCATAACTTCTCTCACCTCACTCAGCTCACATACCTTGACCTTTCCCAGAACACACTCTCCGGCGAGATTCCGGCGGACTTAAGGCGGTGCCAAAAGCTCAAGTATCTCAACCTCTCCTACAATATTCTTGCTGAAGAGTTGAATTTAATTGGCTTGACAAACTTACAAACTCTTGACTTATCAGGCAACAGGCTTTATGGAGATCTTGGGTTTAATTTCCCTGCCATTTGTGACAAATTGAGTAGTTTGAATATCTCAGGGAATAATTTCACTGGGACGATTGATGAGTGCTTCGATCAGTGTTTGAAATTGGAGCAATTGGATTTGAGCACTAATAAGCTAAGTGGGGATATATGGATGGGAATTGCAAAGCTGAGAACTTTTTCTGTTTCAGAGAATTTTCTCAGTGGGAAAATTCCTCCATCAATTTTTCCAGTGAACTGCAATCTTGAAGTTCTTGACATTTCAGAAAATATGTTCGCAGGGATTGTACCTAAGGAGGTTGCTAACTGCAAGAATTTAGCGATTCTGAATCTCTCGAACAACAAATTCAATGGATCAATACCTAAAGAAATTGGTTCCATTTCTGGGATGGAAGCATTGTACTTGGGGAACAATAGTTTCTCAAGAAATATCCCAGAAGAACTCTTGAACCTGACCAATTTGGTATTCTTGGATTTAACCAGAAACCGTTTTGGTGGGGACATACAAGAGATATTTGGGAAATTCAAGCAGGTTAAGTATCTTCTATTACACACAAATTCTTACACTGGAGGGTTATCTTCATCAGGAATTCTCAAACTACCAAACATTTTACGCTTGGACCTAAGTTACAACAACTTCTCAGGTCCATTGCCCACAGAGATGTCTCAAATGTCAAGCCTCAAGTTATTAATGTTAGCCTACAATCAATTCAATGGACCTATTCCATCTGAATTTGGAAACTTGCCTCACCTTCAAGCTCTTGACCTATCATTCAACAACTTGTATGGGCCAATCCCACCAACTCTTGGAAACTTAACCTCTCTTTTGTGGCTCATGCTTGCAAACAATTTATTAACAGGTGAAATCCCAAGAGAGTTGGGAAACTGTTCTAGCTTATTATGGCTAAACCTTGCAAATAACAAACTCACAGGAAAATTCCCCCCTGAATTGGCCAATATAGGAAGAAACGCCATGGTCACGTTTGAATCAAATAGACAATATGACACAATCAGTGCTGGCTCTGGTGAGTGCTTAGCCATGAAGAGATGGATTCCTGCAGATTACCCTCCATTTAGTTTTGTTTATGACATCCTTACAAGAAAGAATTGCAGAAGCATTTGGGACAGATTGCTTAAAGGGCATGGGATTTTTCCGAGTTGTAGTGCAGGTTCATTTTCACAAACATGTCAGATCTCTGGTTATGTTCAGCTAAGTGGGAACGAACTCTCCGGTGAAATCCCTCGAGAAATTGGAAAGATGCTGAATTTGAGCATGTTGCATTTAGGGTTCAATAAATTTTCTGGGGAATTACCTGCGGAGGTGAAAAGTATGCCGCTTGTGGTGTTCAACTTAACAAGAAATGAGTTTGCTGGGGAAATCCCTTGGGAAGTTGGAACCATGAAGTGTTTAATGAATCTTGATCTCTCTTACAACAATTTTTCTGGGGTTTTCCCTTCAAGTTTGGGCAGCTTAACAGAGCTCACAAAGTTCAACATTTCTTATAATCCCTTTATTTCAGGTGAGATTCCATCAGCAGGACAACTAGCTACGTTCGAGAAATACTCATATTTGGGAGATCACCTCTTGCATCTCCCAAGTTTCATCGACAACTCCACCGATGGCAAAACAAACACTACCTTTCGTAACAGAGCCACAAAAAAAACCACGAATGTCTCTGTTTTCCTGGTGATCTTTGCTCTCATTCTTGCTTTCTTAGTATTTGGTCTTCTTACCGTCATCGTCTGTCTACTGATAAAATCCCCATCGGAAGAACCACTCCTGAGAGACATAAAAATCGACCATGAATCTGGAACCTCGTCCCCATGGTTGTCGGACACGGTTAAGGTTATTCGATTGGACAAGACAGCTTTCACACACGCTGATATCTTGAAAGCCACAGGCAACTTCTCAGACGACAGAATCATAGGCAAAGGAGGGTTTGGAACAGTGTACAGAGGAATATTTTCAGATGGGAGAGAAGTGGCAGTGAAAAAGCTTCAAAGAGAAGGACTTGAAGGCGAAAAAGAATTCAGAGCAGAAATGGAAGTTCTTTGTGGCCATGGCTTCGGTTGGCCCCACCCAAACCTCGTCACACTCTATGGTTGGTGCCTCGACGGTTCAGAAAAACTATTAGTTTACGAATACATTTCAGGTGGGAGCTTAGAAGATCTCATAACTGACAGAACAAGATTCACTTGGAAACGACGGCTAGAAGTTGCCATTGATGTTGCTCGAGCTTTGGTTTACTTACACCATGAATGTTACCTCCCAATTGTTCACAGAGATGTGAAGGCAAGCAATGTGTTGTTGGACAACAAAACAGGGAAGGCTAAAGTTACAGACTTTGGGCTGGCCAGAGTGGTTGATGTTGGAGACAGCCACGTCAGCACGATGGTGGCCGGGACGGTGGGGTATGTGGCGCCGGAGTATGGGCACACGTGGAAGGCAACAACGAAAGGGGATGTGTATAGTTATGGGGTGTTGGCTATGGAGTTGGCGACCGGAAGAAGAGCATTGGATGGAGGGGAAGAGTGTTTGGTGGAATGGGGAAGGAGGGTGATGGGTCATGGAAGGAATAGGACGATCGGCCGGCCGGTGATCCCAGTGGTGCTGATGGGTTCTGGTTTGGTTGAAGGTATGGAGGAGATGATGGAGCTGTTAAGGATAGGAGTGAGGTGCACGGCGGAGACCCCGCAGGCTAGGCCGACAATGAAGGAGGTTCTGGATATGCTGATCAAGGTGTATAACTCCAAGGATGATTCAAGCTATGAACATTTCAGAGTCGCTTTGGATTAG 3300 0.4333 MSEHVTDSWGLLLICFLILFSARKIVVAGDSLDTDTEVLLQLQLYLNNQTLVDQGEYTNWSKNSSNPCDWSGIRCSGNETTTRRVVGVDLSDNKITGKIFHNFSHLTQLTYLDLSQNTLSGEIPADLRRCQKLKYLNLSYNILAEELNLIGLTNLQTLDLSGNRLYGDLGFNFPAICDKLSSLNISGNNFTGTIDECFDQCLKLEQLDLSTNKLSGDIWMGIAKLRTFSVSENFLSGKIPPSIFPVNCNLEVLDISENMFAGIVPKEVANCKNLAILNLSNNKFNGSIPKEIGSISGMEALYLGNNSFSRNIPEELLNLTNLVFLDLTRNRFGGDIQEIFGKFKQVKYLLLHTNSYTGGLSSSGILKLPNILRLDLSYNNFSGPLPTEMSQMSSLKLLMLAYNQFNGPIPSEFGNLPHLQALDLSFNNLYGPIPPTLGNLTSLLWLMLANNLLTGEIPRELGNCSSLLWLNLANNKLTGKFPPELANIGRNAMVTFESNRQYDTISAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRSIWDRLLKGHGIFPSCSAGSFSQTCQISGYVQLSGNELSGEIPREIGKMLNLSMLHLGFNKFSGELPAEVKSMPLVVFNLTRNEFAGEIPWEVGTMKCLMNLDLSYNNFSGVFPSSLGSLTELTKFNISYNPFISGEIPSAGQLATFEKYSYLGDHLLHLPSFIDNSTDGKTNTTFRNRATKKTTNVSVFLVIFALILAFLVFGLLTVIVCLLIKSPSEEPLLRDIKIDHESGTSSPWLSDTVKVIRLDKTAFTHADILKATGNFSDDRIIGKGGFGTVYRGIFSDGREVAVKKLQREGLEGEKEFRAEMEVLCGHGFGWPHPNLVTLYGWCLDGSEKLLVYEYISGGSLEDLITDRTRFTWKRRLEVAIDVARALVYLHHECYLPIVHRDVKASNVLLDNKTGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRALDGGEECLVEWGRRVMGHGRNRTIGRPVIPVVLMGSGLVEGMEEMMELLRIGVRCTAETPQARPTMKEVLDMLIKVYNSKDDSSYEHFRVALD 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00700 1099 SUPERFAMILY RNI-like 67 289 - -
Accr12g00700 1099 SUPERFAMILY Protein kinase-like (PK-like) 788 1079 IPR011009 -
Accr12g00700 1099 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 224 1074 - -
Accr12g00700 1099 Pfam Leucine rich repeat N-terminal domain 33 76 IPR013210 -
Accr12g00700 1099 Pfam Protein kinase domain 805 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00700 1099 Pfam Leucine rich repeat 88 141 IPR001611 GO:0005515
Accr12g00700 1099 SUPERFAMILY L domain-like 224 483 - -
Accr12g00700 1099 SMART LRR_typ_2 416 439 IPR003591 -
Accr12g00700 1099 SMART LRR_typ_2 368 392 IPR003591 -
Accr12g00700 1099 SMART LRR_typ_2 319 342 IPR003591 -
Accr12g00700 1099 SMART LRR_typ_2 440 464 IPR003591 -
Accr12g00700 1099 SMART LRR_typ_2 635 658 IPR003591 -
Accr12g00700 1099 SMART LRR_typ_2 152 183 IPR003591 -
Accr12g00700 1099 SMART LRR_typ_2 106 130 IPR003591 -
Accr12g00700 1099 SMART serkin_6 804 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00700 1099 Pfam Leucine Rich Repeat 179 201 IPR001611 GO:0005515
Accr12g00700 1099 SUPERFAMILY L domain-like 571 679 - -
Accr12g00700 1099 FunFam serine/threonine-protein kinase BRI1-like 2 765 883 - -
Accr12g00700 1099 Gene3D Ribonuclease Inhibitor 546 713 IPR032675 -
Accr12g00700 1099 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 36 244 - -
Accr12g00700 1099 Gene3D Ribonuclease Inhibitor 31 174 IPR032675 -
Accr12g00700 1099 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 245 336 - -
Accr12g00700 1099 Pfam Leucine Rich repeat 416 429 IPR001611 GO:0005515
Accr12g00700 1099 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Accr12g00700 1099 Gene3D Ribonuclease Inhibitor 264 361 IPR032675 -
Accr12g00700 1099 Gene3D Ribonuclease Inhibitor 175 263 IPR032675 -
Accr12g00700 1099 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 884 1087 - -
Accr12g00700 1099 FunFam Putative LRR receptor-like serine/threonine-protein kinase 343 504 - -
Accr12g00700 1099 CDD STKc_IRAK 810 1081 - -
Accr12g00700 1099 PRINTS Leucine-rich repeat signature 109 122 - -
Accr12g00700 1099 PRINTS Leucine-rich repeat signature 152 165 - -
Accr12g00700 1099 ProSiteProfiles Protein kinase domain profile. 804 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00700 1099 ProSiteProfiles Leucine-rich repeat profile. 132 153 IPR001611 GO:0005515
Accr12g00700 1099 ProSitePatterns Protein kinases ATP-binding region signature. 810 833 IPR017441 GO:0005524
Accr12g00700 1099 Gene3D Ribonuclease Inhibitor 362 518 IPR032675 -
Accr12g00700 1099 Gene3D Transferase(Phosphotransferase) domain 1 884 1096 - -
Accr12g00700 1099 Gene3D Phosphorylase Kinase; domain 1 771 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00700 Accr-Chr12 6644269 6647768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00700 88 1096 Receptor kinase-like Gene Family AT1G55610 32.680 1.83e-147 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Accr12g00700 Pkinase 6.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00700 - - gmx:100816573 1535.39