Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00697 ATGGGTTGTGTCAACTCGAGGCAAACGGTGTCGGTGACGCCGGCGGTGGATCACTCTGATCTGTTTCAGGGCAATGTGAGTTTGGGACATTCAGGAAGAAGCTTGGGCGAGTTGGATGGTAAGAAGAAGAAGAAGAAGAAGAGTGAGTCAGTGGGCGAGTCAGAGAGAGAGAGTTCAAATTGGGGATGTGATGAATCTTTGAGCTTCAGATTGGGGAATCTGCAGAAATATGTAGAAGGAGAGCAAGTCGCCGCCGGCTGGCCGGCATGGCTCACCGCCGTCGCCAGCGAAGCCATCCACGGCTGGGTACCCCTCCGAGCCGACGCGTTTGAGAAGCTCGAGAAGGTTGGGCAGGGGACATATAGTAGTGTGTTCAGAGCGAAGGAACTTGAGACAGGGAAGATAGTAGCACTGAAGAAGGTGAGGTTTGATATTTTCGAACCAGAAAGTGTGAGATTTATGGCACGAGAAATAATGATTCTGAGAAGGCTTGATCATCCAAACATCATTAAATTGGAGGGTTTGATTACTTCCAAGTTGTCTTCTAGCATATACCTCGTGTTTGAGTACATGGAACATGACATTACAGGGCTCTTGTCCAGCCCTAATATCAAATTTAGTGAATCACAGATAAAATGTTACATGAAACAGCTGTTGTCTGGGCTTGATCATTGTCATTCGCGCGGTGTAATGCATAGAGATATAAAAGGATCGAATCTTCTGGTGAACAATGAAGGGATACTTAAGGTTGCTGATTTTGGATTGGCAAAATTCTCTGTTTCTGGGAACAAACAGCCCCTCACCAGCCGTGTCGTCACTTTGTGGTACCGTCCTCCTGAGCTTTTGTTGGGTTCTACAGATTATGGTCCCTCTGTGGATCTATGGAGTGTTGGCTGTGTATTTGCAGAACTTCTTTTTAGAAAGCCAATTCTTCAGGGCAGAACAGAGGTGGAACAATTGCACAAAATTTTCAAACTTTGTGGCTCCCCACCTGATGAATACTGGAAAAAGACCAAGCTTCCTCATGCAACTTTGTTTAAGCCACAGCAAACATACAATAGTTGCCTCCAAGAGACCTTGAAAGACTTCCACATAACTACCGTGAATCTCCTTCAAACTCTCCTTTCCATTGAATCATACAAGCGTGGAACTGCTTCATCTGCTCTTTCATCAGAGTATTTCAAGACAAAGCCTTATGCATGTGACTCGTCAAGCTTGCCAGTATACTCACCTAGCAAGGAGATTGATGTAAAACACTGGGAGGAGTCAAGAAGAAAAAAGATTGGTGGAAGAGCTCGTGGACCTGAAACAAGAAAACCATCAAGAAAGCCACCAGGAATCAGTAAACTAGCCCCAGCAGAGAGTTTGGTTAATCAGACTCGAAATTGCCGAGTGATGAATTGTAGAACTTCCTTCATCCTAAAAGAGAACAATATAGGCGAGGAGGTTGCAAAGCCATCAACTGATAGTGATAGAGCAGAACAAGATGCTTCTTCCCATGTTAAGAATCCATCTCACGGAGATATTCCCATACTACAAGTTTCAACTTCAAGTGGCTTTGCGTGGGCGAAAAGGCGTAAAGATGATGTTTCGAGAAGAAGATCTCATTGTAGATCCATTTCAAGGGGACATATTTTGAATTCTTCAGAACATTCTTCCCCACATTCAAGAAACAACTTTGATTCAAGAAACCAGGAAAATAAGGAATTCTGTGGAGGAAGATCCAACTCAAGGGGTCATAATGACATACGCGAAATCTCCAAGTTTGCAATGTTTAACCAATGGGGCAAGTTTGATCGCCCAGACTCATTTGATGCTTCTGATGAATACCACTCACAAGATCTATCTATAGCCCTTTATCACAGAGAATATTCAGCATCCAGGAGAAGCAAAATGGATTCTGGAGAGAAGGTAGAATTTTCAGGACCCTTGCTATCTCAAATGCATGCGGTTGATGAGCTCTTGGAGAGACACGAGCGTCACATTCGCCGTACAGTACGAAGATCTTGGTTTCAGAAAGGTAAGAAACATGAGAATAAATTGGAAGACTAA 2052 0.4391 MGCVNSRQTVSVTPAVDHSDLFQGNVSLGHSGRSLGELDGKKKKKKKSESVGESERESSNWGCDESLSFRLGNLQKYVEGEQVAAGWPAWLTAVASEAIHGWVPLRADAFEKLEKVGQGTYSSVFRAKELETGKIVALKKVRFDIFEPESVRFMAREIMILRRLDHPNIIKLEGLITSKLSSSIYLVFEYMEHDITGLLSSPNIKFSESQIKCYMKQLLSGLDHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLAKFSVSGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLFRKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTKLPHATLFKPQQTYNSCLQETLKDFHITTVNLLQTLLSIESYKRGTASSALSSEYFKTKPYACDSSSLPVYSPSKEIDVKHWEESRRKKIGGRARGPETRKPSRKPPGISKLAPAESLVNQTRNCRVMNCRTSFILKENNIGEEVAKPSTDSDRAEQDASSHVKNPSHGDIPILQVSTSSGFAWAKRRKDDVSRRRSHCRSISRGHILNSSEHSSPHSRNNFDSRNQENKEFCGGRSNSRGHNDIREISKFAMFNQWGKFDRPDSFDASDEYHSQDLSIALYHREYSASRRSKMDSGEKVEFSGPLLSQMHAVDELLERHERHIRRTVRRSWFQKGKKHENKLED 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00697 683 MobiDBLite consensus disorder prediction 561 578 - -
Accr12g00697 683 MobiDBLite consensus disorder prediction 35 60 - -
Accr12g00697 683 Pfam Protein kinase domain 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00697 683 MobiDBLite consensus disorder prediction 32 62 - -
Accr12g00697 683 FunFam probable serine/threonine-protein kinase At1g54610 193 433 - -
Accr12g00697 683 Gene3D Phosphorylase Kinase; domain 1 97 192 - -
Accr12g00697 683 MobiDBLite consensus disorder prediction 485 501 - -
Accr12g00697 683 SUPERFAMILY Protein kinase-like (PK-like) 103 399 IPR011009 -
Accr12g00697 683 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Accr12g00697 683 MobiDBLite consensus disorder prediction 420 443 - -
Accr12g00697 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Accr12g00697 683 CDD STKc_CDK9_like 110 394 - -
Accr12g00697 683 PANTHER CELL DIVISION PROTEIN KINASE 108 398 - -
Accr12g00697 683 ProSiteProfiles Protein kinase domain profile. 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00697 683 Gene3D Transferase(Phosphotransferase) domain 1 193 432 - -
Accr12g00697 683 MobiDBLite consensus disorder prediction 420 449 - -
Accr12g00697 683 SMART serkin_6 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00697 683 MobiDBLite consensus disorder prediction 482 578 - -
Accr12g00697 683 MobiDBLite consensus disorder prediction 522 536 - -
Accr12g00697 683 MobiDBLite consensus disorder prediction 541 560 - -
Accr12g00697 683 FunFam probable serine/threonine-protein kinase At1g54610 97 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00697 Accr-Chr12 6558368 6562241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00697 102 426 Core Cell Cycle Gene Families AT5G10270 49.560 3.19e-108 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Accr12g00697 Pkinase 1.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00697 - - gmx:100803328 979.548