Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00690 ATGGAGACTGAGGAAATTAATTTGAACAAAGAATCTGTTCTTGGTGCGGGAAATAATAGTAAGAGTGGTGATGGATTCATTGATAGAAGCAAAGTCAGGATTTTGTTATGTGACAACGATGCCAAGAGTTCGGAAGAGGTGTTTACCCTTCTCTTGAATTGCTCTTATCAGGTTACTTCAGTGAGGTCGGCAAGACAGGTAATTGATGCATTGAACGCAGAAGGGCAAGATATTGATATCATACTTGCTGAAGTTGACCTCCCCATGAAGAAGGGCTGGAAGATGCTGAAGTACATTGCACGGGACAAGGAACTGTGCCGAATCCCTGTTATAATGATGTCGGCTCAAGACGAGGTATCCATTGTTGTTAAGTGCTTAAAACTCGGAGCAGCTGACTATCTAGTGAAGCCTTTACGGACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTTGGACTTGCAGAGAAGAACATCTTGAACTATGACTTTGACCTGGTTGTGTCAGATCCTAGCGATGGTAATACGAACAGTACCACCTTGTTCTCAGATGATACAGATGACAGGTCCAAGAGAAGCACTAATCCTGAGACAGGAATGCCTATCCAACAGGAACATGAGTCGACTGTTGCTGTTGCCTCTGCTGTTTTAGTTGTTGAGGAGCTTCCAAATGCTCAAGCATCAGAATATCGCCCTGACGTGCCTAGAATTAGTGACCGTCGAACTGTTGTAGGAAATTTCTCGGCTGGTCCCAAGAAGAATGAACTTAAGATTGGGGAGTCATCAGCCTTCTTCACATATGTCAAAGCAGCCACAATGAAGAGCAACTTCCAACCAGTCATTCATGCTGATCATAATGCTGTTACACATTTAAGAATGGAAGAAGATACACGTCAAGCATACACTCAACAAGGGGTTCATGATCTTCAAATACATGAAAATGGAGAGACATGTGAAAGCCATTCACAGGATGACTTGCCCAGCAGTAATAGCATCCCAGATTCTTTCTCCATCGAAAGATCTTCTACTCCTCCTGCATCACTGGAAACTTCACAGCAGAAACATTTCATGGAAGAACCTTTACCTCAGGCTATGACCCATCCAAGAAATGGAACTCATAATTCTGAACTTGAAGTATCTGGCATGCTCGGACAACATCATTATCCATATTATATTTCAGGGGTTGTTAATCCCATTATGATGCCTTCATCAGCACAATTGTACCAGAAGAACCTCCAGGACCTGCAGGCCCATGCTGGTACAGCTATCATGGCACAATACAATCATCTTTCGCAATGCCCTCCTCATACAACGGGTATGACATCTTTCCCATATTACCCAATGGGTTTATGCCTACAACCTGGACAGATGTCTACTGTTCCTTCATGGCCATCATTTGGTGGTAGTTCAAGTTCATCTGAAGTCAAAATAAGTAAAGTTGATAGAAGAGAAGCAGCGTTGATGAAGTTTAGGCAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTCAATAGGAAACGACTTGCTGAAAGACGGCCTCGAGTAAGAGGACAGTTTGTTAGAAAGTTGAATGGCATAAATGTTGATCTTAATGGCCAACCTGCTTCCACTGACTACGATGAGGACGATGAAGAAGATGAAGAGGACAATGCAGCACGAGATTCCTCTCCCGACGATGCTTGA 1707 0.4306 METEEINLNKESVLGAGNNSKSGDGFIDRSKVRILLCDNDAKSSEEVFTLLLNCSYQVTSVRSARQVIDALNAEGQDIDIILAEVDLPMKKGWKMLKYIARDKELCRIPVIMMSAQDEVSIVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYDFDLVVSDPSDGNTNSTTLFSDDTDDRSKRSTNPETGMPIQQEHESTVAVASAVLVVEELPNAQASEYRPDVPRISDRRTVVGNFSAGPKKNELKIGESSAFFTYVKAATMKSNFQPVIHADHNAVTHLRMEEDTRQAYTQQGVHDLQIHENGETCESHSQDDLPSSNSIPDSFSIERSSTPPASLETSQQKHFMEEPLPQAMTHPRNGTHNSELEVSGMLGQHHYPYYISGVVNPIMMPSSAQLYQKNLQDLQAHAGTAIMAQYNHLSQCPPHTTGMTSFPYYPMGLCLQPGQMSTVPSWPSFGGSSSSSEVKISKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGINVDLNGQPASTDYDEDDEEDEEDNAARDSSPDDA 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00690 568 MobiDBLite consensus disorder prediction 532 568 - -
Accr12g00690 568 MobiDBLite consensus disorder prediction 180 212 - -
Accr12g00690 568 ProSiteProfiles CCT domain profile. 488 530 IPR010402 GO:0005515
Accr12g00690 568 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Accr12g00690 568 MobiDBLite consensus disorder prediction 544 568 - -
Accr12g00690 568 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 232 IPR045279 GO:0009736
Accr12g00690 568 MobiDBLite consensus disorder prediction 321 357 - -
Accr12g00690 568 SUPERFAMILY CheY-like 28 157 IPR011006 -
Accr12g00690 568 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Accr12g00690 568 SMART REC_2 32 147 IPR001789 GO:0000160
Accr12g00690 568 Gene3D - 32 236 - -
Accr12g00690 568 Pfam CCT motif 488 530 IPR010402 GO:0005515
Accr12g00690 568 MobiDBLite consensus disorder prediction 326 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00690 Accr-Chr12 6513532 6517836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00690 21 567 Response Regulator Gene Family AT5G61380 51.420 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Accr12g00690 Response_reg 9.9e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00690 K12127 - gmx:100786522 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00690 12 6513532 6517836 Accr12g00690 12 6513532 6517836 ECH