Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00684 ATGGAAAACCTTGTGGGACTCTGTAAGGAAGAAGAGAAAATGAATTTGCCTCCTGGATTTCGGTTTCATCCGACTGATGAAGAGCTTATAAGTCATTACTTGTACAAGAAGGCCACTGATTCCAACTTCTCAGCTAGGGCCATTGGGGAGGTAGATTTGAACAGGTCTGAACCATGGGATTTGCCATGGAAAGCCAAAATGGGAGAAAAAGAGTGGTACTTCTTTTGCGTGAGAGACAGAAAATACCCAACTGGTTTGAGAACCAACAGGGCCACTGAAACAGGATACTGGAAAGCCACAGGGAAAGATAGAGAGATTTACAGAGGAAAATCTCTGGTTGGTATGAAGAAAACCCTGGTTTTCTACAAAGGAAGAGCACCCAAAGGAGAAAAAACCAACTGGGTCATGCACGAATACAGATTAGAGGGTAGATTCTCTGTCCACAACCTCCCCAAAACCGCAAAGAACGAATGGGTGATTTGCAGGGTTTTTCAGAAAGGTTCAAGTGGTAAGAAAACTCATATTTCTGGGATGATGAGGTTAGATTCTCTGGGAAATGAATTGGGTTCTTCTGGTTTACCGCCATTGACAGATTCGTCACCTTTCCCTGGCAATAAAACCAAACCTGTCACAGATCAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATCGATGCTCATCAGAGAAACAACCAAGGAGGGATCTTTGATTCCTACAGCAACAGCTTCCCTAATTATGGTGTTTCTTCTTCGAATCCCTCCTCAGACACTACACTTCCCAGAATCGCACTTTCTGGTTCCTTATATTCCTCTCAACAACAACAACCACACCATCATCAAGCTCCTTCAAGTTTAGCTTCGCCCAGTTCTATTTATGGCCTGCAAGACCAGACTTTGCTCAGAGCCTTGCTTGAAAACCAAGAATCAAACAGGAACAATTTCAAGCCCGAGAGGGACATGATCAGCGTGTCTCAAGAAACAGGTCTCACTACCGACATGAACCCGGAAATCTCCTCGGTCGTGTCGAATCTCCATCAGCAGCAGCAGCAGCAACCAACAGCTTCAGCTGCAGCAATGGACTATGAAGGTTTGTGGACTTACTGA 1104 0.4502 MENLVGLCKEEEKMNLPPGFRFHPTDEELISHYLYKKATDSNFSARAIGEVDLNRSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATETGYWKATGKDREIYRGKSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGRFSVHNLPKTAKNEWVICRVFQKGSSGKKTHISGMMRLDSLGNELGSSGLPPLTDSSPFPGNKTKPVTDQSAYVPCFSNPIDAHQRNNQGGIFDSYSNSFPNYGVSSSNPSSDTTLPRIALSGSLYSSQQQQPHHHQAPSSLASPSSIYGLQDQTLLRALLENQESNRNNFKPERDMISVSQETGLTTDMNPEISSVVSNLHQQQQQQPTASAAAMDYEGLWTY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00684 367 MobiDBLite consensus disorder prediction 268 289 - -
Accr12g00684 367 FunFam NAC domain-containing protein 100-like 25 170 - -
Accr12g00684 367 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Accr12g00684 367 MobiDBLite consensus disorder prediction 190 209 - -
Accr12g00684 367 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Accr12g00684 367 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Accr12g00684 367 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Accr12g00684 367 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 306 - -
Accr12g00684 367 MobiDBLite consensus disorder prediction 186 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00684 Accr-Chr12 6455649 6456974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00684 14 367 NAC Transcription Factor Family AT5G07680 55.182 1.78e-127 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr12g00684 NAM 4.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00684 - - qsa:O6P43_022865 511.916