Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr12g00673 | ATGAAGAAGAGACAGGTGGTTGTGAAGAGAGATGTGGTGGCCAAGACGTCGTCGTCGGTGATGAGGAACGTGAGATATTTGGAGTGTCAGAAGAATCACGCGGCCAACATTGGGGGCTACGCCGTGGACGGCTGCAGGGAGTTCATGGCCAGTGGCGATGACGTCACCGCCGGGGCTCTTACGTGTGCTGCTTGCGGCTGTCACAGGAATTTCCACCGAAGAGAAGTTCAGACCGAGGTTGTCTGTGAGTACTCTCCTCCTAATTCCGCTCGCTAA | 276 | 0.5543 | MKKRQVVVKRDVVAKTSSSVMRNVRYLECQKNHAANIGGYAVDGCREFMASGDDVTAGALTCAACGCHRNFHRREVQTEVVCEYSPPNSAR | 91 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr12g00673 | 91 | Pfam | ZF-HD protein dimerisation region | 23 | 76 | IPR006456 | - | |
Accr12g00673 | 91 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 26 | 75 | IPR006456 | - | |
Accr12g00673 | 91 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 15 | 79 | - | - | |
Accr12g00673 | 91 | NCBIfam | ZF-HD homeobox protein Cys/His-rich dimerization domain | 25 | 76 | IPR006456 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr12g00673 | Accr-Chr12 | 6345000 | 6345275 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr12g00673 | 1 | 89 | Zinc finger-homeobox gene family | AT1G18835 | 77.528 | 2.07e-44 | 137 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | zf-HD | Accr12g00673 | ZF-HD_dimer | 8.9e-30 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr12g00673 | - | - | rcu:8263435 | 158.688 |