Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00668 ATGGAGGGTGGTGATGATCTCCGCCACCACCACCATCACCACCACCGCCCCAACTTCCCATTTCAGCTTCTCGAGAAGAAAGAAGATCACCGCCAAGAGCCTACCGCTTCTTGTTCCACTTCTTCCCCTTATCCTTCTCTAGCCATCTCCGCTGAACCCGCCGCCTCCAATTCCAACCGATCCAACCAGGTCCTTAACGTCGTCCCTCCAACGTCTTCCTCCTCCGAACCCTCCAATAAGAAGCCCGCGCCTAAGAGAACCTCCACTAAGGACCGCCACACCAAGGTCGACGGTCGCGGCCGCCGTATCCGAATGCCAGCACTATGTGCAGCTCGCGTCTTCCAGCTCACCCGCGAGCTCGGCCATAAGTCCGACGGCGAAACCATCGAGTGGCTCCTCCAACAGGCTGAGCCCTCCGTCATCGCCGCCACCGGCACCGGGACGATCCCCGCTAATTTCACTTCCCTTAATATCTCTCTCAGAAGCTCCGGCTCAACCATGTCCGTCCCTTCTCAGCTCAGATCGTCTTACTTCAATCCAAACTTCTCCATCCAGCAGCGGAGAAGCTTCTTCCCCGGAATCGGCTTGTCTTCCGATGGCGGCAACAGCAACACTTCAACGCTGCTGAATTTTCAGTCTAATAGTTTCTCCGGTGGCGGCATGCTTCAAGCAAAGCAGGAATTGCGCGGAGGCAGCGAGGGCGGAGGCGTTCCATCCTCGACAACAACGACGTTGGATTTGACAGAGGCAGAAGAAGTTATGGCAGCGAGGAAAAGGCGGCCGACGGAGCAAGAGTTGTCGCCTTCTACTTCGGCGCAGCAATATCAAATGGGAAGTTATTTGTTGCAATCGAGCGCGGGGGCGATTAGCACGAGCCACGCACAGATTCCGGCGAATATTTGGATGGTGACGAATTCGAATAATCAAGTTATGAGCGGTGATCCTATATGGACATTCCCGTCGGTGAATAATAGCGCTTTGTATAGAGGCGCTTCCATGTCTAGTGGGTTACATTTTATGAACTTCCCTACTCCTATGGCTTTGTTGCCTGGTCAACAATTAGGGTCGTCTGGGATTGGTGGCGGCGGAGGAGCTGGGAATATAAACGAGGGACATTTGAGTATGCTTGCCGGCGTCAGCCCGTACCGGCCGGTGAGTGGTGTTTCGGAGTCTCAAGCAAGTGGGTCTCAATCACACCACGGTGATGGTGGTGGAGGCGGCGATGATCGACATGATACAAACAGTCACCGCTCCTAG 1257 0.5489 MEGGDDLRHHHHHHHRPNFPFQLLEKKEDHRQEPTASCSTSSPYPSLAISAEPAASNSNRSNQVLNVVPPTSSSSEPSNKKPAPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSIQQRRSFFPGIGLSSDGGNSNTSTLLNFQSNSFSGGGMLQAKQELRGGSEGGGVPSSTTTTLDLTEAEEVMAARKRRPTEQELSPSTSAQQYQMGSYLLQSSAGAISTSHAQIPANIWMVTNSNNQVMSGDPIWTFPSVNNSALYRGASMSSGLHFMNFPTPMALLPGQQLGSSGIGGGGGAGNINEGHLSMLAGVSPYRPVSGVSESQASGSQSHHGDGGGGGDDRHDTNSHRS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00668 418 MobiDBLite consensus disorder prediction 1 101 - -
Accr12g00668 418 MobiDBLite consensus disorder prediction 403 418 - -
Accr12g00668 418 MobiDBLite consensus disorder prediction 35 82 - -
Accr12g00668 418 MobiDBLite consensus disorder prediction 385 399 - -
Accr12g00668 418 ProSiteProfiles TCP domain profile. 89 143 IPR017887 -
Accr12g00668 418 MobiDBLite consensus disorder prediction 83 101 - -
Accr12g00668 418 MobiDBLite consensus disorder prediction 18 34 - -
Accr12g00668 418 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 32 402 IPR005333 GO:0003700
Accr12g00668 418 Pfam TCP family transcription factor 87 203 IPR017887 -
Accr12g00668 418 MobiDBLite consensus disorder prediction 379 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00668 Accr-Chr12 6281789 6283045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00668 80 412 TCP Transcription Factor Family AT3G47620 44.254 1.53e-62 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr12g00668 TCP 2.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00668 - - qsa:O6P43_022832 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00668 12 6281789 6283045 Accr12g00668 12 6281789 6283045 ECH