Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00656 ATGGGCAAGTCACCAGGAAAATGGATCAAAACTGTACTATTTGGAAAAAAGTCATCCAAATCAAATATTTCCAAAGGAAGAGAGAAACTCGTTAACCAGAAAGAAGCATTGGTTGCGGCCAAGGCACCAGAAACTGGTGTGGCTGTGGATCCACCCCCGTATACTGTCACCAGAAATGAGGAAGAGTTGGAATTGGAGAATAAAGAACCAGAATATCTTTCTCCAGTGAATCAGGAAACTGATTTGGTGTCACATGTTCATGAAGATGCACCTCCTGATCCAGAGGAAATCAGGCAGGAGGAAGCTGCAACAAAGGCGCAGGCTGCTTTTAGGGGTTATTTGGCTCGCAGGGCATTCAAGGCCTTAAAAGGGATAATAAGATTGCAAGCACTTATTCGTGGGCACTTAGTTCGAAGACAAGCTGTTGCTACATTATGTTCCATGTATGGGATAGTCAAATTCCAGGCAGTTGTTCGTGGAGGGAGGGTTAGACAGTATGATGCTGGTTATGAAATCCGTGAGAAGTGCAATATGTTGAAGCTTCAGGATGGAAAACGTGCCAACCCAGTTGATATAGCCACAAAATTTGCAAAGCTATCAACAAATACTTACACCCGCAAGCTTCTCGCATCATCTACTACGATAGTGGCCTTGCGCCTGCAATATGTTCCCGGTGATCCGAATTCAGTGTTAAGTTGGTTGGAGCGCTGGTCTGCATCTCACTTTTGGATACCGATTCCCCAACCCAAGAAAATTCCAGATTCTAGGTCTCGGAGAAAGCATGGTAATACTTCAACTGGAGAAGTTCAAATGAGCAAGTCAAGACGCACTAACCGGAAGGTTCCAACTGTAAATTCTGAATCAGTCCCAGTACAAGCAAATCCTGAATTGGAGAAACCAAAACGAAACCTGAAGAAATTGTCTAACCAAGCTGCAGATCCAGTGCAAGAAAATCCACAAAGTGAGCTTGAAAAGGTTAAGCGGAGCCTGAGAAAGGTCCATAACCCCATTGTTGAGAATGCTGTTCCACCAGAAGTTGAGTCTGAGACCCCAACCCCAAAACAGCACGTGGAAAAGGCGGAAAAGGCAAATATTACCTCAGGACATATTGTTTCAGAGCAAGAGGTTGTTAGCTCTAACGAAATACCTTACAAACAACCAGCATTAGCTGAGCCTGTGCCCAGTGTACCTGATATGGAAATTACTCCTAGACCTTCGGTTAGCAAGGAGGTGTCTGAAATGTCAGGCAGCTATCAAGTGGAACTGGATCCAAAGCTCTTGGTAGAGAATACAAGTAAAGATAGAAATACTTCAGGTGACGGAACTTTAAATGAGCCAAAAGATCTACCAGAGAGTGAATGTAAAGATGAAAATTCTCCACTAACAAATGGTGATCTGAATCATAAGGAAGATCCAACAGGCAATGAAAACCAGAGACCCTCCCGGCGAGCCTCAGTTCAAGGAAAACAGGAACGTACAGAGAATGGTGTACAGAGTAGTCCAACATTACCAAGCTATATGGCAGCAACTGAATCAGCCAAGGCCAAGTTGAGGGCACAAGGATCACCAAGGTTGGGACAAGATAGTGGTGAGAGAAACAACTCTGCACGGCGACATTCTTTGCCATCCTCTACTAACAGCAAAATTAGTTCGCATTCACCAAGGACACAGAGACCAGGTCAACCGGGCAACAAAGGGGGGCACAAAGCTGTTTCATCTAGAGATGGAAACGGAAGAGTAATTCAAGCCGAGTGGAAGAGGTGA 1764 0.4467 MGKSPGKWIKTVLFGKKSSKSNISKGREKLVNQKEALVAAKAPETGVAVDPPPYTVTRNEEELELENKEPEYLSPVNQETDLVSHVHEDAPPDPEEIRQEEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVATLCSMYGIVKFQAVVRGGRVRQYDAGYEIREKCNMLKLQDGKRANPVDIATKFAKLSTNTYTRKLLASSTTIVALRLQYVPGDPNSVLSWLERWSASHFWIPIPQPKKIPDSRSRRKHGNTSTGEVQMSKSRRTNRKVPTVNSESVPVQANPELEKPKRNLKKLSNQAADPVQENPQSELEKVKRSLRKVHNPIVENAVPPEVESETPTPKQHVEKAEKANITSGHIVSEQEVVSSNEIPYKQPALAEPVPSVPDMEITPRPSVSKEVSEMSGSYQVELDPKLLVENTSKDRNTSGDGTLNEPKDLPESECKDENSPLTNGDLNHKEDPTGNENQRPSRRASVQGKQERTENGVQSSPTLPSYMAATESAKAKLRAQGSPRLGQDSGERNNSARRHSLPSSTNSKISSHSPRTQRPGQPGNKGGHKAVSSRDGNGRVIQAEWKR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00656 587 MobiDBLite consensus disorder prediction 367 381 - -
Accr12g00656 587 MobiDBLite consensus disorder prediction 248 303 - -
Accr12g00656 587 MobiDBLite consensus disorder prediction 344 587 - -
Accr12g00656 587 SMART iq_5 121 142 IPR000048 GO:0005515
Accr12g00656 587 SMART iq_5 98 120 IPR000048 GO:0005515
Accr12g00656 587 Gene3D - 96 147 - -
Accr12g00656 587 MobiDBLite consensus disorder prediction 264 292 - -
Accr12g00656 587 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Accr12g00656 587 MobiDBLite consensus disorder prediction 478 507 - -
Accr12g00656 587 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Accr12g00656 587 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Accr12g00656 587 Pfam Protein of unknown function (DUF4005) 489 566 IPR025064 -
Accr12g00656 587 PANTHER IQ-DOMAIN 5-RELATED 1 550 - -
Accr12g00656 587 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Accr12g00656 587 MobiDBLite consensus disorder prediction 526 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00656 Accr-Chr12 6164626 6168594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00656 1 587 IQD Protein Family AT1G74690 44.788 1.68e-131 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00656 - - gmx:100794636 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00055 8 801283 805255 Accr12g00656 12 6164626 6168594 ECH
Accr12g00656 12 6164626 6168594 Accr12g00656 12 6164626 6168594 ECH