Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00652 ATGGAGTTTTCTCTGCGCAGATCTGGTGGCCAAGAAGGTGATGAACCAGTCAAGAAAGAGAAAACAATTAGTGAATCTACTCCTCCTGCTCATAATCATCATGAAGCTCCTCCTCATCTTATTAAACAAGATTCTACTGTTGCCCAGGTGCCACCCATGAATACTACTGATAGATCCGTCGTGGACGCTTCTGGAGCACCTCAAGCATCCTCAGACAAAAAGGGAGAGGACGTTGATGAACTTGAATCAGCGAGAGTTGAAATGGGGGAGGTGAGAGAAGAAAACCAAAGGCTAAAGATGTGTTTGGAGAGAATAATGAAGGAATACCATGACCTGCAAATGCAATTCCAAGTTATAGCTCAACAAGAAGCAGCCACCACGAAATCTTGTGGTGATCAAAGACCAACTAATATTGTCAAAAATCAAGAAGCAGCTTCTGAGGAATCAGATCTGGTCTCACTCAGTCTTGGAAGAGTTCCAGCTAGTAGTAACGAAAAATCAAAAGTCATGAGCTCCAAACCATCATTACAATTACAGCGAGAAGAAGAAGAAGAAGAAAAAGACTTGGCTCTTGGACTGGATTGCAAGTTTGAAACATCAAAATCTGGAAGCACAACAGAAGCATTGCCAAATAATAATGGAAGCCCCACCAATACCTCTGAATTAGCGCACAAGGCAGAAGAAGCTGGAGAGAGTTGGCCACCAAGTAAGGCAGCACTTAATAATAAATCCCCCAGAGATTCTTCTACAGATCAAGATGAAGTTTCCCAACAAAATCCTGCTAAGAAGGCCAGAGTTTGTGTCAGGGCTAGATGTGACACCCCAACATTGAATGATGGATGCCAATGGAGGAAATATGGACAGAAAATATCCAAGGGAAATCCTTGTCCAAGAGCTTACTATCGCTGCACAGTTGCACCAAATTGTCCAGTAAGAAAGCAGGTGCAAAGATGTGTAGAGGACATGTCGGTTCTAATCACTACCTATGAAGGAAACCACAACCACCCTCTTCCTCTCTCTGCTACTGCCATGGCTTCCACCACCGCTGCTGCTGCTTCCATGCTCTTGTCTGGCTCATCTTCAACATCCAATAATCCCACTAGTTTATTGCCGTCTTTAACGGTCCCGGCCGCCACCATTGGTTCTGATCTCCCCGGCGGTATCAACTTCTACCTCTCAGATGGCTCCAAACCAAAGCAATTCTACCTCTCAAATCCAGCACTATCATCTTCACCATCACATCCAACAATTACCATCGACCTCACTTCCAATCCTTCCTCTTCAAATTATTTCTCCTCGCCCCACTTCAACAGATTCAACTCATCAAACTACAATAACCCTCCAAGATTCCCTTCTTCAACAACCAGTCTCAGCTTCGGTTCCTCAGACTCCAACACAATGCCGTGGAGCAACAATAATGTGGGCTTCCTGGGTTACAACTATAACACTCAACCATATAATAATAATAATAACAGAAACATCCTCAGCAGCATCAACCTCGGAAGACAACTACCGATTCAAACTCCTCCTCCTCCTCAAGTTCATCAAAATCCTTCACTGCCAGACACCATAGCTGCGGCAACTAAAGTGATCACAGCTGACCCAACTTTTCAGTCAGCTTTGGCTGCTGCACTTACTTCCATTATCGGCACAGGAAATAATAATAATAATTATAGTGCTAATAGTGTTAGTGGGAATAGCACACAAGGTGTTGGAGAAATCAACTCGGGTCAGAAAATTAACCTATGGGGAGATGTTTTTGCAGCTTCTTCAGCATCTGGTGGGTCTGCTTCTAATAAAGTCAGTGGATGTGGTTCAAGCTTCTTGAGTAAAACGACGACGCCGGCGGCCGGAACACAAGCAGCTGGAAATAGTGGCTTGATGTTTCTGCCTCCATCTTTGCCATTTTCTTGCTCCAACACCGCGTCTGCGTTATCTCCGGCTGATAATAGAGACAAGTCCAATTCGTGA 1971 0.4439 MEFSLRRSGGQEGDEPVKKEKTISESTPPAHNHHEAPPHLIKQDSTVAQVPPMNTTDRSVVDASGAPQASSDKKGEDVDELESARVEMGEVREENQRLKMCLERIMKEYHDLQMQFQVIAQQEAATTKSCGDQRPTNIVKNQEAASEESDLVSLSLGRVPASSNEKSKVMSSKPSLQLQREEEEEEKDLALGLDCKFETSKSGSTTEALPNNNGSPTNTSELAHKAEEAGESWPPSKAALNNKSPRDSSTDQDEVSQQNPAKKARVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVAPNCPVRKQVQRCVEDMSVLITTYEGNHNHPLPLSATAMASTTAAAASMLLSGSSSTSNNPTSLLPSLTVPAATIGSDLPGGINFYLSDGSKPKQFYLSNPALSSSPSHPTITIDLTSNPSSSNYFSSPHFNRFNSSNYNNPPRFPSSTTSLSFGSSDSNTMPWSNNNVGFLGYNYNTQPYNNNNNRNILSSINLGRQLPIQTPPPPQVHQNPSLPDTIAAATKVITADPTFQSALAAALTSIIGTGNNNNNYSANSVSGNSTQGVGEINSGQKINLWGDVFAASSASGGSASNKVSGCGSSFLSKTTTPAAGTQAAGNSGLMFLPPSLPFSCSNTASALSPADNRDKSNS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00652 656 ProSiteProfiles WRKY domain profile. 272 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g00652 656 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 58 561 IPR044810 GO:0003700
Accr12g00652 656 MobiDBLite consensus disorder prediction 156 176 - -
Accr12g00652 656 FunFam probable WRKY transcription factor 31 262 339 - -
Accr12g00652 656 Gene3D WRKY domain 261 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr12g00652 656 SMART WRKY_cls 277 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g00652 656 MobiDBLite consensus disorder prediction 198 222 - -
Accr12g00652 656 MobiDBLite consensus disorder prediction 123 266 - -
Accr12g00652 656 MobiDBLite consensus disorder prediction 72 92 - -
Accr12g00652 656 Pfam WRKY DNA -binding domain 278 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr12g00652 656 MobiDBLite consensus disorder prediction 177 194 - -
Accr12g00652 656 MobiDBLite consensus disorder prediction 237 259 - -
Accr12g00652 656 MobiDBLite consensus disorder prediction 47 66 - -
Accr12g00652 656 MobiDBLite consensus disorder prediction 1 92 - -
Accr12g00652 656 MobiDBLite consensus disorder prediction 1 28 - -
Accr12g00652 656 MobiDBLite consensus disorder prediction 123 149 - -
Accr12g00652 656 SUPERFAMILY WRKY DNA-binding domain 270 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00652 Accr-Chr12 6111017 6114908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00652 88 551 WRKY Transcription Factor Family AT5G15130 43.215 8.22e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr12g00652 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00652 - - gmx:100804403 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00061 8 899855 902804 Accr12g00652 12 6111017 6114908 ECH
Accr12g00652 12 6111017 6114908 Accr12g00652 12 6111017 6114908 ECH