Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00640 ATGAAAAGTGTTACCGTTTTCTGGGTTTTCCTGGTGATTTCCGTCGTCGTTTACCACCCTTCCTCTTTTGCTCTCACTCAAGATGGTCTGGCATTGTTGGAAATCAAAAGCGCTTTGAATGATACTAAGAATGTTCTTAGCAACTGGCAGGATCTTGCTGAGTCTCCATGTTCATGGACCGGTATCACTTGTTATCCTGGCGAACAGCGAGTTCGCTCAATAAATCTGCCCTACATGCAACTCGGAGGTATTATCTCTCCCAGCATTGGCAAACTCAGTAGACTGCAGAGACTGGCACTACATCTGAACAGCTTACATGGAACTATTCCTCCTGAAATTACCAATTGTACTGAGCTAAGAGCATTGTACCTGAGGGCTAATTATTTGCAAGGCGGAATACCATCAAATATTGGAAACCTTTCCTACTTAACCATATTGGATTTATCAAGCAATTCATTGAAGGGTGCTATACCTTCATCTATTGGCCGCCTCACACATTTGAGACTTCTGAACTTGTCTACCAATTTCTTTTCTGGTGAAATCCCTGACATCGGAGTGCTAAGCACCTTCGGACATAACTCCTTTACAGGAAACTTGGATCTTTGTGGGCGGCAAGTTGATAAACCTTGTCGAACGTCGCTTGGCTTCCCTGTGGTGTTACCTCATGCTGCAAGTGATGAAGCTACAGTTCCTACGCCCAAAAGATCTTCACGTTACATGAAGGTGCTGCTAATAGGGGCCATGTCTGCTTTGGCCCTTGCACTTGTGATAATGGTTTCATTCCTCTGGACTTGTATTCTGTCAAAGCAGGAAAGGGCTGCTCGGAGATACAAAAACATCAAGAAGCATTTTGATCCAGAATCAAGCACTAAAATTATGACCTTCCACGGCGATCTGCCACACCCATCATCCACCCTCGTTGAAAAGCTGGACTCTCTTGATGAAAAAGATGAAGTAGGATCAGGAGGGTTGGGTACTGTTTACAGAATGGTCATGAATGATTCGACAACATTTGCTGTTAAGAGGATGGACAGAAATCTTGTTGGATCTGAGCAGGTTTTTGAGAGAAACTTGGAGATTTTGGGCAGCGTCGCACACATAAATCTAGTGAATCTGCGTGGTTACTGCAAGCTTCCTTCTTCAAAGTTCCTTATCCATGATTACTTTGCCATGGGCAGCTTAGATTATCTATTGCACGAAAATGGTGGAGAACAATTCTTGAATTGGAGTGCTCGTTTGAAGATAGCCCTTGGATCTGCAAGGGGTTTGGCATATTTGCACCATGAATGCTCTCCAAAAATTGTGCACAGCAATATAAAATCCAGCAACATCCTTCTTGATGGAAACTTGGAGCCTCATGTCTCTGATTTTGGCCTTGCAAAGCTCTTGGCTGATAAGGATACCAATGTTACCACTGTAGTTGCTGGCACATTTGGCTACATGGCACCAGAGTATCTTGAAAGTGGTAGAGCTACAGTCAAGTCAGATGTGTATAGTTTTGGAATATTACTGTTAGAACTTGTGACAGGAAAGAGACCAACAGATACTTACTTTGCAAAGCAGGGACTAAACGTTGTAGGATGGATGAACATGTTGCTGAGAGAGAAGAGGATGGAGCAATTGATTGACAGAAGATGCTGTCGAGATGCAGATGCAGCAAGTGTTGAAGCAATGATTGATGTGGCAGCAAGATGCACAGATGGTAATCCAGATGAGCGTCCATCCATGAAACAGGTGCTACAGTGGCTGGAACAAGAAATTGCCATGTCTCCTTCTTCAAGTGACTCCTATGAATCCCATTCTGATCATAGTTAA 1815 0.4353 MKSVTVFWVFLVISVVVYHPSSFALTQDGLALLEIKSALNDTKNVLSNWQDLAESPCSWTGITCYPGEQRVRSINLPYMQLGGIISPSIGKLSRLQRLALHLNSLHGTIPPEITNCTELRALYLRANYLQGGIPSNIGNLSYLTILDLSSNSLKGAIPSSIGRLTHLRLLNLSTNFFSGEIPDIGVLSTFGHNSFTGNLDLCGRQVDKPCRTSLGFPVVLPHAASDEATVPTPKRSSRYMKVLLIGAMSALALALVIMVSFLWTCILSKQERAARRYKNIKKHFDPESSTKIMTFHGDLPHPSSTLVEKLDSLDEKDEVGSGGLGTVYRMVMNDSTTFAVKRMDRNLVGSEQVFERNLEILGSVAHINLVNLRGYCKLPSSKFLIHDYFAMGSLDYLLHENGGEQFLNWSARLKIALGSARGLAYLHHECSPKIVHSNIKSSNILLDGNLEPHVSDFGLAKLLADKDTNVTTVVAGTFGYMAPEYLESGRATVKSDVYSFGILLLELVTGKRPTDTYFAKQGLNVVGWMNMLLREKRMEQLIDRRCCRDADAASVEAMIDVAARCTDGNPDERPSMKQVLQWLEQEIAMSPSSSDSYESHSDHS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00640 604 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Accr12g00640 604 Pfam Protein kinase domain 315 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00640 604 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 73 587 - -
Accr12g00640 604 SUPERFAMILY L domain-like 25 201 - -
Accr12g00640 604 Gene3D Phosphorylase Kinase; domain 1 275 388 - -
Accr12g00640 604 Gene3D Transferase(Phosphotransferase) domain 1 390 596 - -
Accr12g00640 604 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 187 - -
Accr12g00640 604 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 389 596 - -
Accr12g00640 604 Pfam Leucine rich repeat 118 175 IPR001611 GO:0005515
Accr12g00640 604 Gene3D Ribonuclease Inhibitor 25 212 IPR032675 -
Accr12g00640 604 SUPERFAMILY Protein kinase-like (PK-like) 295 584 IPR011009 -
Accr12g00640 604 ProSiteProfiles Protein kinase domain profile. 313 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00640 Accr-Chr12 6019088 6022378 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00640 8 591 Receptor kinase-like Gene Family AT2G35620 45.205 4.27e-176 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Accr12g00640 Pkinase 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00640 - - gmx:100797653 900.968