Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00639 ATGAGTCAGTTCATTTGGAAGATTCAAATGAAAAGTGTTACCGTTTTCTGGGTTTTCCTGGTGATTTCCGTCGTCGTTTACCACCCTTCCTCTTTTGCTCTCACTCAAGATGGTCTGGCATTGTTGGAAATCAAAAGCGCTTTGAATGATACTAAGAATGTTCTTAGCAACTGGCAGGATCTTGCTGAGTCTCCATGTTCATGGACCGGTATCACTTGTTATCCTGGCGAACAGCGAGTTCGCTCAATAAATCTGCCCTACATGCAACTCGGAGGTATTATCTCTCCCAGCATTGGCAAACTCAGTAGACTGCAGAGACTGGCACTACATCTGAACAGCTTACATGGAACTATTCCTCCTGAAATTACCAATTGTACTGAGCTAAGAGCATTGTACCTGAGGGCTAATTATTTGCAAGGCGGAATACCATCAAATATTGGAAACCTTTCCTACTTAACCATATTGGATTTATCAAGCAATTCATTGAAGGGTGCTATACCTTCATCTATTGGCCGCCTCACACATTTGAGACTTCTGAACTTGTCTACCAATTTCTTTTCTGGTGAAATCCCTGACATCGGAGTGCTAAGCACCTTCGGACATAACTCCTTTACAGGAAACTTGGATCTTTGTGGGCGGCAAGTTGATAAACCTTGTCGAACGTCGCTTGGCTTCCCTGTGGTGTTACCTCATGCTGCAAGTGATGAAGCTACAGTTCCTACGCCCAAAAGATCTTCACGTTACATGAAGGTGCTGCTAATAGGGGCCATGTCTGCTTTGGCCCTTGCACTTGTGATAATGGTTTCATTCCTCTGGACTTGTATTCTGTCAAAGCAGGAAAGGGCTGCTCGGAGATACAAAAACATCAAGAAGCATTTTGATCCAGAATCAAGCACTAAAATTATGACCTTCCACGGCGATCTGCCACACCCATCATCCACCCTCGTTGAAAAGCTGGACTCTCTTGATGAAAAAGATGAAGTAGGATCAGGAGGGTTGGGTACTGTTTACAGAATGGTCATGAATGATTCGACAACATTTGCTGTTAAGAGGATGGACAGAAATCTTGTTGGATCTGAGCAGGTTTTTGAGAGAAACTTGGAGATTTTGGGCAGCGTCGCACACATAAATCTAGTGAATCTGCGTGGTTACTGCAAGCTTCCTTCTTCAAAGTTCCTTATCCATGATTACTTTGCCATGGGCAGCTTAGATTATCTATTGCACGAAAATGGTGGAGAACAATTCTTGAATTGGAGTGCTCGTTTGAAGATAGCCCTTGGATCTGCAAGGGGTTTGGCATATTTGCACCATGAATGCTCTCCAAAAATTGTGCACAGCAATATAAAATCCAGCAACATCCTTCTTGATGGAAACTTGGAGCCTCATGTCTCTGATTTTGGCCTTGCAAAGCTCTTGGCTGATAAGGATACCAATGTTACCACTGTAGTTGCTGGCACATTTGGCTACATGGCACCAGAGTATCTTGAAAGTGGTAGAGCTACAGTCAAGTCAGATGTGTATAGTTTTGGAATATTACTGTTAGAACTTGTGACAGGAAAGAGACCAACAGATACTTACTTTGCAAAGCAGGGACTAAACGTTGTAGGATGGATGAACATGTTGCTGAGAGAGAAGAGGATGGAGCAATTGATTGACAGAAGATGCTGTCGAGATGCAGATGCAGCAAGTGTTGAAGCAATGATTGATGTGGCAGCAAGATGCACAGATGGTAATCCAGATGAGCGTCCATCCATGAAACAGGTGCTACAGTGGCTGGAACAAGAAATTGCCATGTCTCCTTCTTCAAGTGACTCCTATGAATCCCATTCTGATCATAGTTAA 1842 0.4338 MSQFIWKIQMKSVTVFWVFLVISVVVYHPSSFALTQDGLALLEIKSALNDTKNVLSNWQDLAESPCSWTGITCYPGEQRVRSINLPYMQLGGIISPSIGKLSRLQRLALHLNSLHGTIPPEITNCTELRALYLRANYLQGGIPSNIGNLSYLTILDLSSNSLKGAIPSSIGRLTHLRLLNLSTNFFSGEIPDIGVLSTFGHNSFTGNLDLCGRQVDKPCRTSLGFPVVLPHAASDEATVPTPKRSSRYMKVLLIGAMSALALALVIMVSFLWTCILSKQERAARRYKNIKKHFDPESSTKIMTFHGDLPHPSSTLVEKLDSLDEKDEVGSGGLGTVYRMVMNDSTTFAVKRMDRNLVGSEQVFERNLEILGSVAHINLVNLRGYCKLPSSKFLIHDYFAMGSLDYLLHENGGEQFLNWSARLKIALGSARGLAYLHHECSPKIVHSNIKSSNILLDGNLEPHVSDFGLAKLLADKDTNVTTVVAGTFGYMAPEYLESGRATVKSDVYSFGILLLELVTGKRPTDTYFAKQGLNVVGWMNMLLREKRMEQLIDRRCCRDADAASVEAMIDVAARCTDGNPDERPSMKQVLQWLEQEIAMSPSSSDSYESHSDHS 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00639 613 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Accr12g00639 613 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 34 196 - -
Accr12g00639 613 Pfam Protein kinase domain 324 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00639 613 Gene3D Ribonuclease Inhibitor 34 221 IPR032675 -
Accr12g00639 613 Gene3D Transferase(Phosphotransferase) domain 1 399 605 - -
Accr12g00639 613 Pfam Leucine rich repeat 127 184 IPR001611 GO:0005515
Accr12g00639 613 Gene3D Phosphorylase Kinase; domain 1 284 397 - -
Accr12g00639 613 SUPERFAMILY L domain-like 34 210 - -
Accr12g00639 613 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 398 605 - -
Accr12g00639 613 SUPERFAMILY Protein kinase-like (PK-like) 304 593 IPR011009 -
Accr12g00639 613 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 82 596 - -
Accr12g00639 613 ProSiteProfiles Protein kinase domain profile. 322 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00639 Accr-Chr12 6019061 6022378 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00639 17 600 Receptor kinase-like Gene Family AT2G35620 45.205 5.39e-176 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Accr12g00639 Pkinase 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00639 - - gmx:100797653 900.968