Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00625 ATGACCCTTAAAGGTGGCACAAAGCAGGCCTGTGCAGCCTGCAAGTTTCAGAGAAGAAAGTGTACCCCAGAATGTGTTCTCGCTCCTTACTTCCCTGCCGATCAACCCAAGGCGTTTCAGAATGTCCACAAGCTATTTGGAGTCAGCAACGTTGAGAAGATACTCAAGACCTTGGAACCTACCCAGAAGAAAATAGCCATGGAATCCATCATTTGCCAATCTAATTTCAGAGATAAATACCCTGTTCGTGGCTGCTGGGAGGAGATTTGCAGGCTTAATTACCAAATATGGTACGTTGAAGAAGAGCTTCGTGCTGTTCATCAGCAACTTGAGATTTGCAGACAACATTTTTTGCAGCAGCACCAAGGTTGTTCTTCATCTTTAATGCTTGATGATGTCACTTCACAGTTAGAGTTGGGGATGATGACGACGACACCTCGTAATAATTATGCACTACCACTCTTAAGCCATAATCCTCTGATTATAAAACCAGAGACACATAATTCAGAGCTTGCTTGGCTTGCAGTTTCCGACCAACATTCTTACTGTAACAGCAATAGTTCTGTGGGTTACAATTCCATGGATGTGGAATCTAAGGATCATGTTGTTACACCAAATAGCTTGTGGGTCCACCGGAATCCCTGCGGAGACGATGATGGAGATTCCATGGCCATGGCCATGAATTCCCAGTTGCAGTTGGTTGCCTCGCCGCCACTGGACATGGAACAAAAAGTTGTCGGAGAATATTACGATGAGATTACTCCACCTTTTTGA 774 0.4457 MTLKGGTKQACAACKFQRRKCTPECVLAPYFPADQPKAFQNVHKLFGVSNVEKILKTLEPTQKKIAMESIICQSNFRDKYPVRGCWEEICRLNYQIWYVEEELRAVHQQLEICRQHFLQQHQGCSSSLMLDDVTSQLELGMMTTTPRNNYALPLLSHNPLIIKPETHNSELAWLAVSDQHSYCNSNSSVGYNSMDVESKDHVVTPNSLWVHRNPCGDDDGDSMAMAMNSQLQLVASPPLDMEQKVVGEYYDEITPPF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00625 257 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Accr12g00625 257 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Accr12g00625 257 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00625 Accr-Chr12 5825086 5825859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00625 1 141 AS2 family AT3G47870 51.282 4.14e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr12g00625 LOB 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00625 - - jcu:105640476 241.121