Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00622 ATGGAGAATTCCGACTTAAATTTCATCTTCAACTCCAAATGGGCGTCAACGGTGGCCAGCATATGGATTCAGTGCACCAGTGGCTCCTTGTACACTTTTTCCATATACTCCGATGCCCTCAAGTCCAGTCAGCACTATGATCAGTCTACCCTAGATACCGTATCCGTCTTCAAGGACATCGGCGTCAACGCCGGCGTCCTCTCCGGTCTTCTTTATGATTTCGCTGCTCATCGAACAAGGGCCGGCCCTTGGGTGGTTCACCTTCTCGGCGCAGCTCAATGCTTTTTGGGCTATTTCCTTATGTGGGCCGCCGTCGCCGGCGTCATTCCTCCGCCGCCCGTGCCGCTTATCTGTTTGTTCATGCTCGTAGCTGCTCATGCTCAGAGCTTTTTCAATACTTCCAATGTTGTCACCGGCGTGCGTAATTTCCCTTACTATAGTGGTACCATTGTGGGCATCATGAAGGGATTTCTTGGTCTCAGTGGAGCAATACTAATCCAAGTATATCGGACAATATTTAAGAACAAGTCTACAGCATATCTCCTGATGCTAGCCTTCTTACCACCTGTAAATACTTCGCTGCTTACGTGGTTTGTCAGAATCCATAATACTCGTGAAGGGGATGAGAGGAAATATCTAAATATTTTGTCTATGATAGCTCTAGTTGTAGCTGCTTATCTTATGGCCATCATAATTCTAGAGAACATTTTTAGTCTGCAATTATCAGTCCGCATCCTTGTGTTCATTTTGTTGATAGTTTTGTTAGCTTTGCCTCTATGGGTTGCACTAAAAGCCCAGAAAAGAAATTTTAAAAATGCTTCTGAGAGTTTTCCTTCTGAGGCTTCCCTGTTAATTGCTGAACCAACCAACTCAGATAGGGAGAAGAGGGATGTAAGACAAGATTCTGCCGAGGGTCATACGCCTAGTAATACAGATCAAGATATGGAGACTAACCATCGAAGAGCATTTTCACTAGGAGAAAACCAGAATCTGGCCCAAGCTTTGCAATCTGTGAACTTTTGGTTTCTGTTTGTTTCAATGGCATGTGGTATGGGATCAGGACTTGCGACAGTCAATAACATCGGCCAGATTGGAGGATCCCTCGGTTACACGAGTCATGAGACAGGTACCTTGGTTTCTTTGTGGAGCATTTGGAATTTCCTGGGTCGTTTTGGCGCCGGTTACATTTCTGATTATTTCCTACACACAAGAGGATGGGCAAGACCTTTATTTATGTTCATCACTCTAATGATCATGAGCATTGGCCATGTGGTTATAGCTTCTGGACTGCCTGCTGCTCTATATGTTGGTTCGGTATTGGTTGGTGTTTGTTATGGCTCTCAGTGGTCCCTAATGCCTACAATCACTTCTGAAGTTTTCGGGCTAGCTCATATGGGAAGCATATTCAACACCATTACCATAGCAGGTCCTGTTGGATCTTACATATTCTCCGTGAGAGTTGTTGGGTATATATATGACAAAGAAGCATCAGAAGGGTATACATGCACTGGAAGTCATTGTTTTATGTTATCTTTCCTTATTATGGCTTCTGCTGTTATTTTGGGTTCTATGGCTGCTTTATGCTTGTTTTTTCGAACAAGAAGTTTCTATAGTCAAGTTATTCTCAGACGACTTCAGTATCCCTCTGAGTGA 1653 0.4392 MENSDLNFIFNSKWASTVASIWIQCTSGSLYTFSIYSDALKSSQHYDQSTLDTVSVFKDIGVNAGVLSGLLYDFAAHRTRAGPWVVHLLGAAQCFLGYFLMWAAVAGVIPPPPVPLICLFMLVAAHAQSFFNTSNVVTGVRNFPYYSGTIVGIMKGFLGLSGAILIQVYRTIFKNKSTAYLLMLAFLPPVNTSLLTWFVRIHNTREGDERKYLNILSMIALVVAAYLMAIIILENIFSLQLSVRILVFILLIVLLALPLWVALKAQKRNFKNASESFPSEASLLIAEPTNSDREKRDVRQDSAEGHTPSNTDQDMETNHRRAFSLGENQNLAQALQSVNFWFLFVSMACGMGSGLATVNNIGQIGGSLGYTSHETGTLVSLWSIWNFLGRFGAGYISDYFLHTRGWARPLFMFITLMIMSIGHVVIASGLPAALYVGSVLVGVCYGSQWSLMPTITSEVFGLAHMGSIFNTITIAGPVGSYIFSVRVVGYIYDKEASEGYTCTGSHCFMLSFLIMASAVILGSMAALCLFFRTRSFYSQVILRRLQYPSE 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00622 550 Gene3D MFS general substrate transporter like domains 211 531 IPR036259 -
Accr12g00622 550 MobiDBLite consensus disorder prediction 289 316 - -
Accr12g00622 550 SUPERFAMILY MFS general substrate transporter 214 535 IPR036259 -
Accr12g00622 550 Pfam Major Facilitator Superfamily 343 535 IPR011701 GO:0022857|GO:0055085
Accr12g00622 550 CDD MFS_Mch1p_like 12 522 - -
Accr12g00622 550 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 538 - -
Accr12g00622 550 MobiDBLite consensus disorder prediction 289 303 - -
Accr12g00622 550 Pfam Nodulin-like 13 262 IPR010658 -
Accr12g00622 550 SUPERFAMILY MFS general substrate transporter 18 202 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00622 Accr-Chr12 5797941 5799952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00622 9 547 Nodulin-like Gene Family AT1G74780 56.182 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00622 - - lja:Lj1g3v0437880.2 780.785