Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00618 ATGTCCGAAGGATCCCCCTCTGCTCCTCCGATTTCCGGCGAACCCGCTAACCGATCCTCTCCGGAACCAAATTCCGAAAACCACGTCCCTGATTCTCAAAACGGGGTTGCCACTCCTAAGGAAGAAACGCCAGCCGCTCCTACGACTACGAGGAGCAACCGGCCGTCGCGCGCGTGCACCATTCGCGCTGCGTCTCGTCTCTATTCATCGTTGCAGCCGGCGATCCAACGGAAGTCCAAAGAGGCGAAGAAGGAGGAGAAGCAGGAAGACTCGCCACAGCAGCAATGCAGCAAGATCGTGACGCCATTAGTAGAACCGCCCCCACCTTCGCAGTTGCCTCGGTGGAACCTGCGGTCCATGTGGGAATTAGCTTCTGTACTAAATTTCTTGCATGTATTTAGGCCTCTCTTAAACATCTCAGTAGAATTCTCGGCTGAAGAATTCGAGACAGCTCTTCTTATGCCGAACGATACATTGAGTGATATACATATGCCGCTGTTAAAGGCAATTCCTCCCATCACAAGAATGGCACTCACACGTGATACTTGGATAACTGTGTTATGCAGAAAATTGAGAGATTGGTGGTTTTGGGTTGCTGATGGCGATGTTCCACTTGTTGCTTCACATGGGGCGGAGGTTGAAGCATATAAATCACTTGATCCTGGGGTCCGTGTTGTCATCCTAAAAGCTTTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAGTTACATTGACAACTCACTCAGACATGGCGTTCAACTATCAACATTTCGAAAAGAGCGTATTGGGGGTGATTCTCATGGAATTTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTATATCGTGAAACAAGGAAAACTGAAGTAGTTCAAGTGAAGAAGGGGAAGGCAAAAGGTTCAAAGGTTCTTTCTAATACATCATATCAGTGGGAAGCTGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTGCTCGAGTAAAAATAGAACTGAGGTTTCTCTAGGGAAAAAGCTGAAGATAGACATGCTTCCTGAGATTGAGAAAGTTCACAAGAGGAAGGAGAGGTTGCTGAAAAAGCAACACAGACAGGCTCTTCTTCTTGATAATTTCTTAGGGGTTGATGGCCTTGCTACCGGGCGTTCACTTCGTGATAGGAAGCCTGTTACTTACACATTTGATGATTATGATCGGTCCATCAATGAGGCCATTAAAGTAACCAAACAAAAACAGCCATCTCCAGAACCTGCGTCTAGGAGAGAAATGGTAGGAAAGCATGAAACCTTGAGTAATGGTAGCCGGAGTGGTCCTTCACATACCTCCGAACATCTGAATTTTAGTATGCCATCTCCGAAGTCACCTGACTTTGATGATGCTGAGGAAGAGCACAAATCTGAATTATTGGACCGAAGCAATCGACGAAGACAGAGGCCTTTGCGGTACTCAGAGAAAGATTTTGTTGAAGCATTATCTGATAACGATGCTGACTATGACAGCGATGATGATATCGTTGGAGAAGCCGTATATGATGAAGAGTATCTCAGGAAACGTAAGCAGAGAAGGAACCATTCTAGTAGCTCTGAGGGAGATGATGAATATCAGTGGGATGAAGACAATGTTGAAGACGAAGAAGAGGATGATGAAGATTCTCTGAGCATCAGTGAAGACAGTGATAAGCTTCGGAAATCCAGGCAATTGCCAGGTCGTACTAGGAGAGAAACTAAACTCAGGTCTGTAGATGAGATTAACATTGGTTTACGACGCAGTAAGAGGGCCACCAGAAACCGTATCAACTATCGTCAATATGATATGTCAGAATCAGAGCCAGAGTGTACGAAACCTGAGAAGTCTAATGCTTCAGACAATCACTCAGGTCCCAGCGAAAATGGGGATTATATGATGGAAGAAGAAGATTCAGATGACAATGATGGCGAAGATCAGGAAACAAAAGAAGATAATGAGCCCCATGCTAATGTTGAAGAGGAAGAGAGAGAGGAACAAAAGCAACCTCCTGAAAAGTCTGATAGTCCTAACCAGGAGGAAGGCGAGGGCACAAAAAAAAGACGCTTCCTTGATTTGAATGAGCTTGCCCCTACATCTGGTTTTGACGATGGTCTAAACACGATGATGAAAGATGAGGAAAATGATGTTAAAGCTTCCCCCCATTAA 2190 0.4484 MSEGSPSAPPISGEPANRSSPEPNSENHVPDSQNGVATPKEETPAAPTTTRSNRPSRACTIRAASRLYSSLQPAIQRKSKEAKKEEKQEDSPQQQCSKIVTPLVEPPPPSQLPRWNLRSMWELASVLNFLHVFRPLLNISVEFSAEEFETALLMPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWFWVADGDVPLVASHGAEVEAYKSLDPGVRVVILKALCDIRVEQEDIRSYIDNSLRHGVQLSTFRKERIGGDSHGISYWYEDDPIIGHRLYRETRKTEVVQVKKGKAKGSKVLSNTSYQWEAVATNFDEFQDVSEKLCSSKNRTEVSLGKKLKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLGVDGLATGRSLRDRKPVTYTFDDYDRSINEAIKVTKQKQPSPEPASRREMVGKHETLSNGSRSGPSHTSEHLNFSMPSPKSPDFDDAEEEHKSELLDRSNRRRQRPLRYSEKDFVEALSDNDADYDSDDDIVGEAVYDEEYLRKRKQRRNHSSSSEGDDEYQWDEDNVEDEEEDDEDSLSISEDSDKLRKSRQLPGRTRRETKLRSVDEINIGLRRSKRATRNRINYRQYDMSESEPECTKPEKSNASDNHSGPSENGDYMMEEEDSDDNDGEDQETKEDNEPHANVEEEEREEQKQPPEKSDSPNQEEGEGTKKRRFLDLNELAPTSGFDDGLNTMMKDEENDVKASPH 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00618 729 MobiDBLite consensus disorder prediction 608 624 - -
Accr12g00618 729 MobiDBLite consensus disorder prediction 561 595 - -
Accr12g00618 729 MobiDBLite consensus disorder prediction 411 483 - -
Accr12g00618 729 MobiDBLite consensus disorder prediction 520 537 - -
Accr12g00618 729 MobiDBLite consensus disorder prediction 520 729 - -
Accr12g00618 729 MobiDBLite consensus disorder prediction 1 76 - -
Accr12g00618 729 MobiDBLite consensus disorder prediction 1 108 - -
Accr12g00618 729 MobiDBLite consensus disorder prediction 656 700 - -
Accr12g00618 729 MobiDBLite consensus disorder prediction 461 483 - -
Accr12g00618 729 PANTHER REMODELING AND SPACING FACTOR 1 50 720 IPR028938 GO:0006355|GO:0031213
Accr12g00618 729 MobiDBLite consensus disorder prediction 77 92 - -
Accr12g00618 729 Pfam DDT domain 125 170 IPR018501 -
Accr12g00618 729 MobiDBLite consensus disorder prediction 435 455 - -
Accr12g00618 729 MobiDBLite consensus disorder prediction 538 560 - -
Accr12g00618 729 MobiDBLite consensus disorder prediction 638 655 - -
Accr12g00618 729 MobiDBLite consensus disorder prediction 714 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00618 Accr-Chr12 5773725 5780790 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Accr12g00618 DDT 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00618 - - qsa:O6P43_022781 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00092 8 1360593 1369523 Accr12g00618 12 5773725 5780790 CCT