Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00614 ATGGTGAGACCTCCATGCTGTGAGAAGCTCAGTGTTAAAAAAGGTGTTTGGACTCCAGAAGAAGATGCAGAAATGATGGCATATGTCTCAAAGCATGGATCTGGATTTAAGAGGTGTGGGAAAAGCTGCAGGCTCAAGTGGACTAATTACCTGAGGCCAGATCTTAAGAAAGATAGCTTCACACCCCAAGAAGAGGATTTAATTCTTAAGCTTCACGCAGCCATTGGAAGCAGGTGGCCTATGATTGCCCAACAACTTCCTGGGAGAACAGACAACGATGTAAAGAATTACTGGAACACAAGGCTGAAGAAGAAGCTCACTGAGATGGGAATAGACCCTATCACACACAAGCCCTTCTCTAAACTCCTAGCTGATTATGGAAACATTGGAGGCATCCAGAAACCAAACACTAGAATTGGGCCTCTCAGTAAAGACCTGAAGAACACAGTATTGTTCAGATCAGACCCATTTCCTAAGCTACCTTCAAGTTCACCAAAATTGGAACCACTAACAGAAAGTTGCAGCTTTTTCAGTAACAGAGACATGGTGATGGAGAAGGAGACAATCCCAGGAACTATATTTGGGGAAGGCTTCTTATCGTCGTCATCAATTTCATCAACATCTTCTTCTTCTATCTGTTCTAATGCTGCTCAAGAAGAAGGCTTGTCTTTACCCTTTTGTTGGAATGATTTTCTTCTAGAAGATGTTTTCCCACCACCACCTGCTGCTGCTGATAACCCAGAGAATGAAAATCCGACAACCAACGAGAATAAGAATGAGGTGACGTCACAGCAAGTCCCCACCAGCAGTAGTAGTGACGTTCGTTATTCAACGTCATCCTCTGAGATTTCTTTCGTAGAAGCCATGCTTGATCAAGAAAATGAGATGTTCTTGAATTTCCCTCACCTAATGGAGGAACCTTCCACGTCCAACTACTGA 939 0.4334 MVRPPCCEKLSVKKGVWTPEEDAEMMAYVSKHGSGFKRCGKSCRLKWTNYLRPDLKKDSFTPQEEDLILKLHAAIGSRWPMIAQQLPGRTDNDVKNYWNTRLKKKLTEMGIDPITHKPFSKLLADYGNIGGIQKPNTRIGPLSKDLKNTVLFRSDPFPKLPSSSPKLEPLTESCSFFSNRDMVMEKETIPGTIFGEGFLSSSSISSTSSSSICSNAAQEEGLSLPFCWNDFLLEDVFPPPPAAADNPENENPTTNENKNEVTSQQVPTSSSSDVRYSTSSSEISFVEAMLDQENEMFLNFPHLMEEPSTSNY 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00614 312 MobiDBLite consensus disorder prediction 238 277 - -
Accr12g00614 312 SUPERFAMILY Homeodomain-like 11 98 IPR009057 -
Accr12g00614 312 MobiDBLite consensus disorder prediction 247 277 - -
Accr12g00614 312 PANTHER F14D16.11-RELATED 1 308 - -
Accr12g00614 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 51 IPR017930 -
Accr12g00614 312 CDD SANT 59 102 IPR001005 -
Accr12g00614 312 Gene3D - 11 57 - -
Accr12g00614 312 Gene3D - 59 106 - -
Accr12g00614 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 106 IPR017930 -
Accr12g00614 312 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Accr12g00614 312 FunFam Os07g0634900 protein 59 118 - -
Accr12g00614 312 Pfam Myb-like DNA-binding domain 57 100 IPR001005 -
Accr12g00614 312 SMART sant 56 104 IPR001005 -
Accr12g00614 312 SMART sant 13 53 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00614 Accr-Chr12 5740267 5742388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00614 1 306 MYB Transcription Factor Family AT3G28470 42.331 2.24e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr12g00614 Myb_DNA-binding 7.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00614 K09422 - cave:132176661 313.153