Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00609 ATGGTGTCCACGTCTCAGAAGAAAAGCCTTCACTCACTCCTTGCTGCAAACCTTGGCAAGCTCACCATACCTTCTTCTTCTTCATCCACTGCTCACCATGATTTCGACTTTCCACCTTTCTCTTCTCACGATCCCAATCCATCTCCATCCACTTCTGCCATTCCTGGTAGCCCACAGGTTATTCAGAGTAGGTCCCACTCCTTTGTGGGACCCTCCCCAAGATTCGCCCAATCCTCTAATTCCCTGGCGTTTGTTGATGAACTCGATTCCCAGAGCGACGACGAGGCTGAAATTGATGTCGGAGGTGGATTAGGAACTGATTGTGCAGTTGGTGAAAAGCAAGTGGGTGTGGGTGCTTCTGGAGAGAAATTGGCGGTCAAAATTGGACCTGGGGATTTTCAAATTTTGAGACTTGTAGGGCAAGGAGCGTTCGGGAAGGTTTTTCTGGTAAGGAAAAGGAGTGACCGTTTGGACGGAGACGGCGGTGGTGGTGATGGCATTTTTGCAATGAAGGTGATGCGAAAGGAGACGATCATAAAGAAGAATCATGTGGATTATATGAAAGCTGAGAGGGATATTCTCACTAAAGTAGTTCATCCTTTTATTGTTCAGCTCCGGTACTCCTTTCAGACTAAATCTAAATTATATTTGATCTTGGACTTTATAAATGGAGGACATCTCTTCTTTCATCTGTATCGGCAGGGTATCTTCAGTGAGGATCAGGCAAGGCTTTACGCTGCTGAGATAGTTTCTGCTGTTTCCTATCTTCACAAGTGTGGAATCGTGCATCGGGATCTTAAACCTGAAAATATACTCATGGATGCTGATGGGCATGTAATGTTAACTGATTTTGGATTGGCAAAGGAAATTGATGAATCAGGGAGGTCTAACTCTCTATGTGGGACCATGGAATATATGGCTCCAGAAATCTTACTGGCTAAAGGCCACAACAAGGAAGCAGATTGGTGGAGCATCGGTATACTTTTGTATGAAATGCTAACAGGGAAGGCCCCATTTACACACGCTAATAGAAAGAAACTTCAAGAGAAAATTATTAAAGAGAAAGTGAAGCTTCCACCAATGCTAACCGCCGAAGCTCACTCTTTGCTTAAAGGATTGCTGCAAAAGGATCCATCAAAAAGGCTGGGCAATGGACCAAATGGAGACAACCAGATTAAAAGTCACAAGTGGTTTCACTCAATCAATTGGAAGAAACTGGAGGCAAGAGAACTGCGGCCAAAATTCAAACCAGATGTGAGTGGCTTAGACTGTACAGCCAATTTTGATAAATGCTGGACCTCAGTGTCTCCAGTTGATTCACCAGCACCCACACCTACAGCTTCCGATCATTTCCAGGGCTATACTTATGTGGCACCCAACCCTTGGCTTTCATCTTAG 1398 0.4471 MVSTSQKKSLHSLLAANLGKLTIPSSSSSTAHHDFDFPPFSSHDPNPSPSTSAIPGSPQVIQSRSHSFVGPSPRFAQSSNSLAFVDELDSQSDDEAEIDVGGGLGTDCAVGEKQVGVGASGEKLAVKIGPGDFQILRLVGQGAFGKVFLVRKRSDRLDGDGGGGDGIFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARLYAAEIVSAVSYLHKCGIVHRDLKPENILMDADGHVMLTDFGLAKEIDESGRSNSLCGTMEYMAPEILLAKGHNKEADWWSIGILLYEMLTGKAPFTHANRKKLQEKIIKEKVKLPPMLTAEAHSLLKGLLQKDPSKRLGNGPNGDNQIKSHKWFHSINWKKLEARELRPKFKPDVSGLDCTANFDKCWTSVSPVDSPAPTPTASDHFQGYTYVAPNPWLSS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00609 465 Pfam Protein kinase domain 133 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00609 465 ProSitePatterns Protein kinases ATP-binding region signature. 139 171 IPR017441 GO:0005524
Accr12g00609 465 ProSiteProfiles Protein kinase domain profile. 133 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00609 465 Gene3D Phosphorylase Kinase; domain 1 132 442 - -
Accr12g00609 465 Pfam Protein kinase C terminal domain 419 456 IPR017892 GO:0004674|GO:0005524|GO:0006468
Accr12g00609 465 PANTHER RIBOSOMAL PROTEIN S6 KINASE 75 460 - -
Accr12g00609 465 ProSiteProfiles AGC-kinase C-terminal domain profile. 399 465 IPR000961 GO:0004674|GO:0005524|GO:0006468
Accr12g00609 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Accr12g00609 465 SMART serkin_6 133 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00609 465 MobiDBLite consensus disorder prediction 25 72 - -
Accr12g00609 465 SUPERFAMILY Protein kinase-like (PK-like) 131 458 IPR011009 -
Accr12g00609 465 FunFam Non-specific serine/threonine protein kinase 131 245 - -
Accr12g00609 465 FunFam Non-specific serine/threonine protein kinase 222 417 - -
Accr12g00609 465 MobiDBLite consensus disorder prediction 46 72 - -
Accr12g00609 465 SMART pkinase_C_6 399 458 IPR000961 GO:0004674|GO:0005524|GO:0006468
Accr12g00609 465 Gene3D Transferase(Phosphotransferase) domain 1 222 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00609 Accr-Chr12 5708984 5712190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00609 58 459 AGC Kinase Gene Family AT3G08720 60.049 7.03e-173 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Accr12g00609 Pkinase 2.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00609 K04688 - qsa:O6P43_022772 698.353