Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00598 ATGTCTAACCCTAGTCATGAAATTGCAAGGGCTGTGGCAGCTACTGCAACTGTTATGTTGTTATTTTGTGGGGTTCTCTTTTACTTGTTCTACAAGTTTTTTCTATCTCAAAGGCTCAAGTTTGCTGCTGCTATTCTGAGTCATAAAGGGGTGAAGCATGCGGACATAGAGAAAGTTAGTGGCAAAGTGAAAGGATTGGTTGTTGAAGAAGATGGGCTCCACATTCTTTACATGCTGGAAGCAGATGGTACACCAGTGAGAACAAGATTCCCAAGATGTTGGTTTAATCCAAGTTATGACAATTCTGTAGAATCCATGAAAATAAATGTCGAACCAGTACCTTCCCTGCCTACTTCAGTTTCTGCTTCATCACCTCTTACACAAGGAGTTTCACAATACCCTCGACTTAAGATTCCTGACAATAAAACTCCTCCTCCACTGTCGCCGCCACCACCACCTCCTCCTCCACCACCGCCGCCACCACCGCCTCCTTTGAGAAAGGAAGTTACAAAGGTGCCATTGATGCCACCTCCTCCTCCAAAGGCTCGTGGATTCACTTCATCATTGAGACCACCATTTCCACCTAAAGGGAAATCAAACATGCAGAACAGCAAAGAGGTAACCCTAGACAAGAGTTATGCTGACACAAAGAGGCTGAAGCCTCTTCACTGGGATAAGGTTGCAGCCAACGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTCTTGTTTGATGATCAACTCATTGTAAAACTATTTGGATATTCAAGCAACAACAAAACCCAAGGAAGATACATAAGTCTTTCAACCAATCCCAACTCCATTTCACCACCTCAAATATTCATCCTGGAGCCTCGAAAATCCCAGAACACCGCAATTGTGCTAAAGTGTTTAGCTATTTCTCGAGATGAAATCCTAGAAGCACTCCTTGATGGCCAAGGACTAAGTGCTGACACACTTGAGAGGCTCACCAGATTAGCTCCAACTCAAGAAGAAACAGCCAAAATCGTCAGTTTCAATGGCAACCCAGAAAAGCTAGCAGATGCAGAGTCTTTCCTTTACTTCATCCTCAAAGCAGTACCAACAGCATTCACTCGTTTGAAAGCAATGTTTTTCAGATCAACCTATGATTCTGAAGCACTTCAGCTTAAAGAAAACCTGGCAACAGTTGAAATGGGATGTAAAGAGCTGAGGACTAGTGGTCTCTTTAGAAAACTCCTAGAGGCCATTCTTAAAGCCGGGAACCGAATGAATGCTGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTAAATTCTCTTAGCAAACTTTCTGATGTGAAAAGTACAGATGGTAAAACCAGTTTGCTTCACTTCATTGTCGAACAAGTGGTTCAGTCAGAAGGAAGAAGGGAAGCTACAAATCAGAAGCAGAACCTAACACAACCAGAGACAGAAAGAGAATATTTAACTCTTGGCTTAACAGTGGTAGGTGGTCTAAGTGATGAGTTATCTGAAGTAAGAAAAGCAGCCAGCATACAGCATCACAGTTTTATCAGTGTGTGTTCATATCTGCAAGCTCATGTCACTGAAATTCGCCAGATTATGACATGTTGTAATGATAATGGTGATCAGAGAGGTGGTGGGTTTATAAAGGAAATGAAAGGGTTCTTAGAGGACTGTGAAGAGGAGCTGAAGGTGGTGAAAGAAGAGCAGGAAAGGATCATGGAGCTTGTGAAGAAGACGAACGAGTATTATCTAGCAGGAGCATCAAAAGACAGTATCATGTCAAATCCTTTTCAGCTGTTTGTCATTGTAAATGATTTTGTTCACATGGTAAATCAGGCTTGCATAGAACTCAAGAAAAAGCTAGAAAAGAAAAACGTTGGAGTAGAAGCTGTATTATTATCAACTTCACCATCAAAGAAGATGCCACACAGATTTCCAAACTTCGATTTTCACTTTGTGTCAAATATGTCATCCGGTACATCTTCAAGCCAATCAGAGGATGATTTTTGA 2007 0.4185 MSNPSHEIARAVAATATVMLLFCGVLFYLFYKFFLSQRLKFAAAILSHKGVKHADIEKVSGKVKGLVVEEDGLHILYMLEADGTPVRTRFPRCWFNPSYDNSVESMKINVEPVPSLPTSVSASSPLTQGVSQYPRLKIPDNKTPPPLSPPPPPPPPPPPPPPPPLRKEVTKVPLMPPPPPKARGFTSSLRPPFPPKGKSNMQNSKEVTLDKSYADTKRLKPLHWDKVAANVDHSTVWDQINDGSFLFDDQLIVKLFGYSSNNKTQGRYISLSTNPNSISPPQIFILEPRKSQNTAIVLKCLAISRDEILEALLDGQGLSADTLERLTRLAPTQEETAKIVSFNGNPEKLADAESFLYFILKAVPTAFTRLKAMFFRSTYDSEALQLKENLATVEMGCKELRTSGLFRKLLEAILKAGNRMNAGTSRGNAQGFNLNSLSKLSDVKSTDGKTSLLHFIVEQVVQSEGRREATNQKQNLTQPETEREYLTLGLTVVGGLSDELSEVRKAASIQHHSFISVCSYLQAHVTEIRQIMTCCNDNGDQRGGGFIKEMKGFLEDCEEELKVVKEEQERIMELVKKTNEYYLAGASKDSIMSNPFQLFVIVNDFVHMVNQACIELKKKLEKKNVGVEAVLLSTSPSKKMPHRFPNFDFHFVSNMSSGTSSSQSEDDF 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00598 668 PANTHER FORMIN-RELATED 3 649 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Accr12g00598 668 Gene3D Formin, FH2 domain 228 629 IPR042201 -
Accr12g00598 668 SMART it6_source 209 624 IPR015425 -
Accr12g00598 668 MobiDBLite consensus disorder prediction 139 185 - -
Accr12g00598 668 MobiDBLite consensus disorder prediction 117 131 - -
Accr12g00598 668 Pfam Formin Homology 2 Domain 211 609 IPR015425 -
Accr12g00598 668 ProSiteProfiles Formin homology-2 (FH2) domain profile. 209 635 IPR015425 -
Accr12g00598 668 MobiDBLite consensus disorder prediction 117 206 - -
Accr12g00598 668 SUPERFAMILY Formin homology 2 domain (FH2 domain) 154 623 - -
Accr12g00598 668 Coils Coil 547 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00598 Accr-Chr12 5624255 5626361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00598 8 661 FH2 protein (formin) Gene Family AT1G70140 40.453 1.47e-146 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00598 - - gmx:100791689 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00598 12 5624255 5626361 Accr12g00598 12 5624255 5626361 ECH