Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00597 ATGGGTAGTGATGTTCTCCGGCAACAGGACCCGCCTTACAGCTCCGGCGAGCTGCATGTTCTTGCCGTCGATGACAGTTATGTCGATCGTAAGGTCATTGAGCGGTTGCTGAAAATTTCTTCTTTCAAAGTGACAGTTGTAGAGAGTGGAACTAGAGCTCTTGAATATTTGGGATTGGATGGACAGAAGAAGAGCTCCATTGGATTTGAGAGTGTTAAGGTTAATATGATAATGACGGACTATTCAATGCCGGGGATGACAGGATATGAGCTGCTTAAGAAGATCAAGGAATCATCTATTTTTAGAGAGATTCCAGTTGTGATCATGTCATCTGAGAATATCCTGACTCGAATTGATAGATGCTTAGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCAGTGAAGTTGGCAGATGTGAAACGATTGAAAGAAGTCATAGTGAAAGGTGAAGGAAAGGAAAGTGGAGGAGAGAGAGAATCTCACAAAAAAAGAAAGAGATCAGAAGATTGCAGTGAACTTCCGTCAACACCATGTTCATCTGTGTCTTGTCCTTGTGATCCATCATCTTCTTCACCATCTGCATTGTCCTCAAAGAAGTATAGATTACTAGCAGAGGTTGAACAATGA 627 0.4242 MGSDVLRQQDPPYSSGELHVLAVDDSYVDRKVIERLLKISSFKVTVVESGTRALEYLGLDGQKKSSIGFESVKVNMIMTDYSMPGMTGYELLKKIKESSIFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLADVKRLKEVIVKGEGKESGGERESHKKRKRSEDCSELPSTPCSSVSCPCDPSSSSPSALSSKKYRLLAEVEQ 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00597 208 MobiDBLite consensus disorder prediction 172 197 - -
Accr12g00597 208 CDD REC_typeA_ARR 20 142 - -
Accr12g00597 208 Pfam Response regulator receiver domain 20 139 IPR001789 GO:0000160
Accr12g00597 208 MobiDBLite consensus disorder prediction 150 198 - -
Accr12g00597 208 MobiDBLite consensus disorder prediction 150 171 - -
Accr12g00597 208 SMART REC_2 18 146 IPR001789 GO:0000160
Accr12g00597 208 SUPERFAMILY CheY-like 17 142 IPR011006 -
Accr12g00597 208 Gene3D - 18 177 - -
Accr12g00597 208 ProSiteProfiles Response regulatory domain profile. 19 147 IPR001789 GO:0000160
Accr12g00597 208 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 204 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00597 Accr-Chr12 5620941 5622551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00597 18 169 Response Regulator Gene Family AT3G48100 73.684 2.53e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr12g00597 Response_reg 5.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00597 K14492 - gmx:100796843 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01294 10 35708061 35709103 Accr12g00597 12 5620941 5622551 ECH
Accr12g00597 12 5620941 5622551 Accr12g00597 12 5620941 5622551 ECH