Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00581 ATGGAGTTCAAACACTTGTGGGTAGAATCGATTCCATTTGTAGCCATGGTGATGTTGGAGTGCTTGGATGTGGGATTGACCACATTAAGTAAAGCAGCCATGTCCAGAGGTATGAGCCACTTCGTCTTCGTCGTCTACTCAAATGCTCTTGCCTCTGCTATACTCCTTCCTTCCTCTTTCATCTTCACCAGAAAAAATAGACCTCCACTTTCTCTCTCGCTTCTTTGCAAATTCTTCCTCCTCAGTCTCGTTGGGATAACTGTGATGCAGAATTGTGTTTTCACTGGTATAAACTACAGCTCGCCCACTCTTGGATCTGCTATGAGCAACTTAATTCCAGCGTTTACTTTTGTGCTTGCGGTCATCTTCAGGATGGAGAAGTTAGAGATTAGAAGCACAAAGAGCCAGATGAAAATCTTGGGCACAGTGGTGTCCATCGCAGGAGCATTAGTCGTGACCCTTTACAAGGGAGCTTCCATTGGCAAACCTCCAAGTGATTCCCCTGAAAATCCTTCTCAGTCCTTGTTGGAGCAAACAAATAACTGGGTGATTGGGGGCCTCTTCCTTGCAACTGCTTGTTTATCTCTTGCAGTCTGGAGCATATCTCAGGCAGCTATTCTGAGGGGATATCCGTCTGAGTTGACCATAGTGGCCTTCTATTGCCTCTTTGGAACCATCCAATGTAGCATCCTCTCTCTGATAGTAGTCAGAGATCCCAATGCGTGGACACTTAAGCCTGACATTGAGCTCATCTCCATTATCTATTCAGCGATTTTTGGGAGTGTGGTGACATTTTCAGTGCTGACTTGGTGCATCCACAAGAAAGGACCTGTTTTTGTGGCCATGTTCAAGCCCGTGGGGATTGCAATTGCTGCATTGATGGGTGTGGCCTTCCTTGGGGACACGCTCCATGTTGGCAGTATCATTGGAGCAGTAATAATTGCGATCGGGTTCTACACAGTGTTGTGGGCACAATCCAAAGAGGAAGATGAGAAGTCAAATAAAGTTCATAAGGAACCATCATCACCACCACCACAAAGGAGACCCCTACTAGAAAGTCATCTTGATGAAGCAAATATTTTAGCATAA 1089 0.4555 MEFKHLWVESIPFVAMVMLECLDVGLTTLSKAAMSRGMSHFVFVVYSNALASAILLPSSFIFTRKNRPPLSLSLLCKFFLLSLVGITVMQNCVFTGINYSSPTLGSAMSNLIPAFTFVLAVIFRMEKLEIRSTKSQMKILGTVVSIAGALVVTLYKGASIGKPPSDSPENPSQSLLEQTNNWVIGGLFLATACLSLAVWSISQAAILRGYPSELTIVAFYCLFGTIQCSILSLIVVRDPNAWTLKPDIELISIIYSAIFGSVVTFSVLTWCIHKKGPVFVAMFKPVGIAIAALMGVAFLGDTLHVGSIIGAVIIAIGFYTVLWAQSKEEDEKSNKVHKEPSSPPPQRRPLLESHLDEANILA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00581 362 MobiDBLite consensus disorder prediction 330 350 - -
Accr12g00581 362 PANTHER WAT1-RELATED PROTEIN 12 333 IPR030184 GO:0016020|GO:0022857
Accr12g00581 362 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Accr12g00581 362 Pfam EamA-like transporter family 25 153 IPR000620 GO:0016020
Accr12g00581 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 327 - -
Accr12g00581 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00581 Accr-Chr12 5477334 5479166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00581 1 360 Nodulin-like Gene Family AT3G28050 46.561 1.20e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00581 - - qsa:O6P43_030898 487.263