Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00578 ATGGGTCGAAATCCAAATCCTATTTGGGTACTCTTCATGGTTGTGGTGTTTTCGTTTCTTCTTCCAATGGCTTATACAGAGGATGAGGAAGTGAAGCAGGCAATGGTGAGATTCATGGAGAAACTTGAACCAAAGAATACACCAACAGATATGAACTGGGGTTGGAACTTCTCTTCAGATCCTTGCATTGACAATTGGTATGGAGTTCAGTGTTATTCAGGAAAAAAATTTGTGAAGAATATAGTTCTTGAGGATTCTGGTTTCACGGGGACTTTAGACGCAGCTTCTCTCAGCACATTACAGCTTCTTCAAGTTCTTAGCTTGAAGAACAATAACTTGCACGGCTTAATACCAGAAGAAATAGGAATGTGCAAAGCATTGAGTCTTTTGTATTTAAGTGGCAACAATTTCTCCGGTGACCTTCCTCTCTCTGTTTCACTCTTGGTTAATCTGAAAAGGGTCGATGTTTCAGGTAACAACTTATCCGGTGACCTTCCTGATATGAGTCATATTACAGGGTTGATATCTTTTCGAGCCCAGAATAATGAATTCACTGGGGAAATTCCAAACTTTGTCTTCTCCAACCTGTTGGATCTCAATGTCTCCAACAACAATTTACAGGGTCGAATTCCTGAAGAGATAAGCTTGTTTGGAGCAGACAGCTTTTCTGGTAATCCAAACTTATGTGGGCCCCCACTTGAAAACTCATGTCCTCCTCCTCCTCCTGCAACAGAGAAGAAGAAAACCACAAAATCTTTCAGTCGTAGCTTGGCCATTTGTTCTGGGTACGTGATTCTTGGTGTTCTTATCCTGCTTTACTTGGCATTCAAGATTGTTAAGCTTTTCAACGCCAGAAAGGAGCCATTGAATGCAGAGAAGAAGGAAGAAGCAGAGGAAGTTAGCAAGGAAAAGACTCGAGAATCTCCCAGTGAAGTGAATGGGACTGTAACAAGATCAGAGTATTCATTGTCATCTATTGAAACAGGGATGGTTTCATCAAATCTGGTTGTTCTTACTAGTCCAGTGGTTAGGACACTGAGATTTGAGGACTTGCTAAAAGCTCCTGCAGAATTAGTAGGCAGAGGAAAGCATGGAAGCATGTACAAGGTGATGCTGGAAAGCGGGGTGGTTTTAGCAGTGAAGAGAATCAAAGATTTGGGGATCTCAAAACAGGATTTTGATAAGAGAATGCACAAGTTGAACCAAGTGAAGCATCCTTGTGTACTGCCTCTTCTTGCATTTTATTGCTCCCTGCAAGAAAAGCTTTTGGTGTATGAGTTTCTGCATAATGGTAGCCTCTTCAAGATGTTACGTGGATCTCAAAGTGGCAAAACATTTGACTGGGGAAGCAGACTGAATGTGGCAGCCAACATAGCTGAAGCTTTAGCCTATATGCACGAGGAGCTTAGAGAAAGTGGGATAGCTCATGGGAACTTAAAATCCAGCAACATATTATTCGACAAGAACATGGATCCATGCTTAAGTGAATATGGATTAATGGTGGTTGAGAATCAAGAAAAATCTGCTTTTTATGGAGACCAAAGCAGCATGAAGAACAACAGAAATAACAGCAGCAGAAATCCCAGTGAAGCTTATAGCACCTTCAAGGTGGACACATATGCGTTTGGGGTTGTGCTTCTTGAACTTTTGACAGGAAAAGTGGTTCAGAACAATAATAATGGGTTTGATCTGGTTCGGTGGGTTAACTCAGTGGTGAGAGAAGAATGGACAGTGGAAGTATTTGACAAGTGTTTGATGACAGAAGAAGGTAATAATAATGAGGAGAGGATGATGAGTTTGTTGCACGTAGCTTTGAAGTGTGTGAGTAGGAATCCAAATGAGAGGCTAAGTATGAGTGAAGTTGCAGTAATGACCATTTCTTTGAAGGAGGAACAAGACAGATCCATAACCTTCAATTCCTCCTAA 1926 0.4128 MGRNPNPIWVLFMVVVFSFLLPMAYTEDEEVKQAMVRFMEKLEPKNTPTDMNWGWNFSSDPCIDNWYGVQCYSGKKFVKNIVLEDSGFTGTLDAASLSTLQLLQVLSLKNNNLHGLIPEEIGMCKALSLLYLSGNNFSGDLPLSVSLLVNLKRVDVSGNNLSGDLPDMSHITGLISFRAQNNEFTGEIPNFVFSNLLDLNVSNNNLQGRIPEEISLFGADSFSGNPNLCGPPLENSCPPPPPATEKKKTTKSFSRSLAICSGYVILGVLILLYLAFKIVKLFNARKEPLNAEKKEEAEEVSKEKTRESPSEVNGTVTRSEYSLSSIETGMVSSNLVVLTSPVVRTLRFEDLLKAPAELVGRGKHGSMYKVMLESGVVLAVKRIKDLGISKQDFDKRMHKLNQVKHPCVLPLLAFYCSLQEKLLVYEFLHNGSLFKMLRGSQSGKTFDWGSRLNVAANIAEALAYMHEELRESGIAHGNLKSSNILFDKNMDPCLSEYGLMVVENQEKSAFYGDQSSMKNNRNNSSRNPSEAYSTFKVDTYAFGVVLLELLTGKVVQNNNNGFDLVRWVNSVVREEWTVEVFDKCLMTEEGNNNEERMMSLLHVALKCVSRNPNERLSMSEVAVMTISLKEEQDRSITFNSS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00578 641 Gene3D Ribonuclease Inhibitor 194 237 IPR032675 -
Accr12g00578 641 FunFam Nuclear pore complex protein NUP107 28 190 - -
Accr12g00578 641 SUPERFAMILY Protein kinase-like (PK-like) 356 624 IPR011009 -
Accr12g00578 641 ProSiteProfiles Protein kinase domain profile. 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00578 641 Gene3D Transferase(Phosphotransferase) domain 1 428 640 - -
Accr12g00578 641 SUPERFAMILY L domain-like 54 233 - -
Accr12g00578 641 Pfam Protein kinase domain 357 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00578 641 Gene3D Phosphorylase Kinase; domain 1 326 427 - -
Accr12g00578 641 Pfam Leucine rich repeat 79 137 IPR001611 GO:0005515
Accr12g00578 641 MobiDBLite consensus disorder prediction 292 316 - -
Accr12g00578 641 PANTHER OS05G0588300 PROTEIN 10 629 - -
Accr12g00578 641 MobiDBLite consensus disorder prediction 292 309 - -
Accr12g00578 641 Gene3D Ribonuclease Inhibitor 30 193 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00578 Accr-Chr12 5437745 5439983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00578 55 621 Receptor kinase-like Gene Family AT1G68400 35.821 2.59e-95 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr12g00578 Pkinase 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00578 - - pcin:129319179 946.036