Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00570 ATGAAGGAGGGGGGCGAGGGATTTGTGAGGGCAGATCAGATTGATCTGAAGAGTATAGACGAACAGCTAGAGAGACACATGAACAAGGCATTGACTATGGAGAGGAACAAGAGGAAAGAGGGAGATGATGATTTTGCTACCATTGATATTGCTGTCAGCCCTAGGGCCATCAAAAACACCACCTTCAGGAAGCAAAAGCAGGACTGGGAGATTGACCCTTCCAAGCTCATCATCAAGTCAGTTATTGCTCGTGGCACTTTCGGCACCGTCCACCGCGGTGTCTACGATGGCCAAGACGTTGCCGTTAAATTGCTGGACTGGGGTGAAGAAGGCCAAAGGACAGAAGCTGAAATTTCTTCACTTAGGACGGCATTTATACAGGAAGTTGCTGTTTGGCATAAACTTGATCATCCCAATGTCACTAAGTTTATAGGAGCAACAATGGGGTCATCAGAACTACAGGTACAAACTGAGAATGGGCTAATCAGCATGCCAAGCAATATCTGTTGCGTTGTTGTGGAGTATCTTCCCGGGGGTGCACTGAAATCATACCTAATAAAAAACCGTAGAAGGAAGTTAGCTTTTAAGGTGGTCATCCAGCTTGCTCTAGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAAAAGATTGTCCACAGAGATGTAAAGACAGAGAACATGTTATTGGATAAGTCACGTACAGTTAAAATTGCCGACTTTGGGGTTGCACGTGTTGAGGCTTCAAATCCTAATGACATGACAGGGGAGACTGGCACACTTGGTTACATGGCTCCAGAGGTGTTAAATGGCAAGCCCTATAACAGGAAGTGTGATGTGTACAGTTTTGGTATCTGTTTATGGGAGATATATTGTTGTGACATGCCATACCCTGACCTAAGTTTTTCAGAGGTCACCACAGCTGTTGTTCGTCAGAATCTGAGACCAGAGATACCAAGGTGTTGCCCAAGTTCTCTAGCAAATGTAATGAAGAGATGTTGGGATGTCAATCCTGAAAAGCGACCCGAGATGGATGAGGTGGTTTCCTTGCTAGAAGCCAATGACACATCAAAAGGTGGAGGCATGATCCCCCTTGATCAACAGCAAGGTTGTTTCTGTTTCCGCAAGTTCAAAGGACCATGA 1140 0.4544 MKEGGEGFVRADQIDLKSIDEQLERHMNKALTMERNKRKEGDDDFATIDIAVSPRAIKNTTFRKQKQDWEIDPSKLIIKSVIARGTFGTVHRGVYDGQDVAVKLLDWGEEGQRTEAEISSLRTAFIQEVAVWHKLDHPNVTKFIGATMGSSELQVQTENGLISMPSNICCVVVEYLPGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKSRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTTAVVRQNLRPEIPRCCPSSLANVMKRCWDVNPEKRPEMDEVVSLLEANDTSKGGGMIPLDQQQGCFCFRKFKGP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00570 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Accr12g00570 379 FunFam Serine/threonine-protein kinase HT1 176 361 - -
Accr12g00570 379 Coils Coil 16 36 - -
Accr12g00570 379 Gene3D Phosphorylase Kinase; domain 1 64 159 - -
Accr12g00570 379 PRINTS Tyrosine kinase catalytic domain signature 277 299 IPR001245 GO:0004672|GO:0006468
Accr12g00570 379 PRINTS Tyrosine kinase catalytic domain signature 321 343 IPR001245 GO:0004672|GO:0006468
Accr12g00570 379 PRINTS Tyrosine kinase catalytic domain signature 173 186 IPR001245 GO:0004672|GO:0006468
Accr12g00570 379 PRINTS Tyrosine kinase catalytic domain signature 211 229 IPR001245 GO:0004672|GO:0006468
Accr12g00570 379 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 68 352 - -
Accr12g00570 379 Gene3D Transferase(Phosphotransferase) domain 1 176 367 - -
Accr12g00570 379 CDD STKc_MAP3K-like 82 350 - -
Accr12g00570 379 SUPERFAMILY Protein kinase-like (PK-like) 58 350 IPR011009 -
Accr12g00570 379 ProSiteProfiles Protein kinase domain profile. 76 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00570 379 FunFam Kinase suppressor of Ras 1 65 160 - -
Accr12g00570 379 Pfam Protein tyrosine and serine/threonine kinase 78 350 IPR001245 GO:0004672|GO:0006468
Accr12g00570 379 SMART serkin_6 76 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00570 Accr-Chr12 5392031 5395329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00570 1 311 MAP Kinase Kinase Kinase AT5G50000 81.073 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Accr12g00570 PK_Tyr_Ser-Thr 8.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00570 - - qsa:O6P43_022726 674.085