Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00544 ATGGAAGAAACATTTGTTCCCTTCGAGGGGATCAAGAATGACCTCAAAGGAAGAATTGTATGCTACAAAGAAGATTGGACAAGTGGTTTCCGAGCTGGTATCAGGATTCTTGCCCCAACCACATACATATTTTTCGCTTCAGCAATTCCAGTTATTTCTTTTGGAGAGCAACTGGATAGAAATACAGAGGGAACTCTGACTGCAGTGCAGACTCTTGCATCAACAGCACTCTGTGGTGTTATCCATTCAATCCTTGGAGGGCAACCTCTCCTCATTCTTGGTGTAGCTGAGCCGACAGTTCTAATGTATACCTTTATGTATAATTTTGCTAAGGATAGAAAGGATTTGGGTCACAAACTCTTCCTTCCTTGGACTGGATGGGTGTGTGCTTGGACAGCCTTGCTGCTCTTTTTGTTGGCCATTCTTGGTGCATGCTCCATAATCAACAGATTCACACGCATTGCCGGGGAACTATTTGGTCTGCTCATTGCAATGCTATTTATGCAGCAGGCCATAAGGGGAGTTGTGGAAGAGTTTGGTGCACCCAAGAACCAGAGAGAAAGTACCAATTCGATTGCACTTGAACCATCTTGGCTGTTTGGCAATGGGATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTTTTTACAGCATTGCAAAGTCGTACAGCTAGATCCTGGCGCTATGGGACAGGTTGGCTTAGGGGATTTATTACTGATTATGGAGTCCCACTGTTGGTGCTAGTGTGGACTGCTGTATCTTACATACCAGTCAAGGAGGTCCCAAAGGGGATCCCCAGGCGACTCTTTAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACAGTTATCAAGGAAATGTTGGATGTTCCTGCTGTGTATATTATTGGAGCATTTATACCAGCAACTATGATTGCTGTACTTTACTACTTTGATCACAGTGTTGCGTCACAACTTGCACAGCAGAAGGAGTTCAATCTCAGAAAACCTTCTTCCTATCATTATGACCTTCTTCTTTTGGGCTTTTTGACTTTGTTGTGCGGGCTTATTGGAATTCCTCCTTCCAATGGGGTCATTCCACAATCTCCAATGCATACAAAAAGCTTAGCTACTCTAAAACATCAGCTTCTGAGGGGGAAGCTCATATCAACTGCACGACAAAGCATGCGGAAAAATATGAACCTCAGCCAGTTGTACCAGAATATGCAAGCAGCATATGATGAAATGCACACTCCACTGGTCCATCAAATGCCACCTGCACTGAGGTTAAAAGAGCTGAAGGAGTCCACCATCCAACTTGCTTCTTGTCAAGGATACGTTGATGCCCCTGTTGATGAGATTGTATTTGATGTGGAAAAGGATGTTGATGAGCTTTTGCCTGTTGAAGTTAAAGAACAGCGTCTCAGCAATCTGCTGCAGGCATTGATGGTTGGTGTTTGTGTTGCTGGTATGCCTGTTCTGAAGAAGATACCAACTTCAGTCCTATGGGGCTACTTTGCTTTCATGGCTATAGAGAGTCTGCCAGGAAATCAGTTTTGGGAGAGAATATTGTTTCTGTTAACTGCTCCGAATCGAAGATACAAGGTGCTGGAGAAAATGCATGCAACTTTTATTGAGACTGTACCCTTCAAATCAGTTGCCTTGTTCACCTTGTTACAAACTGCTTACTTGCTTGCGTGCTTTGGTATAACTTGGATACCAATTGCTGGGGTCCTTTTCCCGTTGTTAATCATGCTTCTTGTCCCAGCACGCCAATATGTCCTTCCTAAGATTTTTAAAGGTGCGCATCTTCAAGAGTTGGACGCTGCAGCCTACGAGGAAGCCCCAGCTGTTGCTTTCAACATGGCATTTGAAGATACAAGTAGTCAGATTCAAGCAACAAATGTCAACATCAGTGAAGGGGAAATTCTTGATGAGATTATTACAAGGAGTCGTGGGGAGGTTCGTGGCATCCACAGCCCGAGAACAAGTAGTTCGACACCAACCTCATTTGGTGATATAAGACCTGCTAATAGTCCACAGCTAGTGCGAAGGATGCACAGCCCTCGAATAACCGAATTAAGGGGAGAAAGCAGCCTAGGATCAGCCAAGCAAGAGATCATGCTAAAGCAAACTCCTAGTCGAGGGTCATCAATTCCTAGACAGGATCCTAAAGATTCATCTTCAGGCTAA 2175 0.4428 MEETFVPFEGIKNDLKGRIVCYKEDWTSGFRAGIRILAPTTYIFFASAIPVISFGEQLDRNTEGTLTAVQTLASTALCGVIHSILGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCAWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIRGVVEEFGAPKNQRESTNSIALEPSWLFGNGMFALVLSFGLLFTALQSRTARSWRYGTGWLRGFITDYGVPLLVLVWTAVSYIPVKEVPKGIPRRLFSPNPWSPGAYSNWTVIKEMLDVPAVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRGKLISTARQSMRKNMNLSQLYQNMQAAYDEMHTPLVHQMPPALRLKELKESTIQLASCQGYVDAPVDEIVFDVEKDVDELLPVEVKEQRLSNLLQALMVGVCVAGMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILFLLTAPNRRYKVLEKMHATFIETVPFKSVALFTLLQTAYLLACFGITWIPIAGVLFPLLIMLLVPARQYVLPKIFKGAHLQELDAAAYEEAPAVAFNMAFEDTSSQIQATNVNISEGEILDEIITRSRGEVRGIHSPRTSSSTPTSFGDIRPANSPQLVRRMHSPRITELRGESSLGSAKQEIMLKQTPSRGSSIPRQDPKDSSSG 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00544 724 Gene3D Helical hairpin bin 18 60 - -
Accr12g00544 724 Pfam HCO3- transporter family 204 380 IPR011531 GO:0006820|GO:0016020
Accr12g00544 724 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016020
Accr12g00544 724 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Accr12g00544 724 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Accr12g00544 724 MobiDBLite consensus disorder prediction 652 670 - -
Accr12g00544 724 MobiDBLite consensus disorder prediction 698 724 - -
Accr12g00544 724 MobiDBLite consensus disorder prediction 648 724 - -
Accr12g00544 724 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00544 Accr-Chr12 5067276 5071418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00544 1 693 Antiporters AT3G62270 73.304 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00544 K24194 - gmx:100805633 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00544 12 5067276 5071418 Accr12g00544 12 5067276 5071418 ECH