Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00541 ATGCAGAGCTCAGCCTTCACCCTCTCTCCTTCTCTTCCTCTTCTCAAGTCTCGCTCTCGTGCTCCTCCTCGCTTCGATGCCATACGCCTCTCTGCTTCTTCCTCTTCCAAACCCAATGTCGCTTGCTCCTCCACTTCTTCCACGCGCCGATCATGGTCCCTCGCTTCTTCTTCGTCCCCATTTCCATTCAGGCCGTGGACATCTTTCACCACACTTTCTCCCTCCGATCCCGATGCATCTCCTTTCGAGGCCAGGGCTGTTTCCGTGCCTGAGAGCAGCAGTGAGGAATCCAATAGTATGGCCAACACGTTGGTGCTTGGATCCCTGTTTGGTTTCTGGTACCTCTTCAACATCTACTTTAACATCTACAACAAGCAGGTCTTGAAGGCGTTCCATTACCCATTCACCATCACTTCAATTCAATTTGCCGTTGGGTCTATCCTTGTATTATTTATGTGGGGTTTCAATCTATATAAAAGGCCTAAAATCAGTGGTGCCCAGCTTGCGGCAATAGTTCCACTGGCTTTGGTACATACCTTAGGGAACCTTTTCACAAATATGAGTCTTGGAAAGGTAGCCGTATCCTTCACTCACACAATCAAAGCAATGGAGCCCTTCTTCTCAGTGCTCCTTTCTGCTATGTTCCTTGGAGAGTTCCCTACACCTTGGGTAGTTGGTTCCCTACTGCCCATCGTTGGTGGAGTGGCACTTGCATCAGTTACTGAGGCCTCCTTCAATTGGGCTGGATTTTGGAGTGCAATGGCGTCCAATTTGACTAATCAGTCTCGCAATGTTCTCAGCAAAAAAGTCATGGTTAAGAAAGATGATTCTATGGACAATATAACTCTCTTCTCAATAATAACCGTCATGTCCTTCTTCATGTTAGCCCCAGTGGCTGTATTCACAGAGGGCGTTAAACTTACCCCTGAATATCTGATATCTGCGGGGTTGAATGTTAAACAAATATACACCAGATCACTTATTGCTGCACTGTGTTTCCATGCATATCAACAGGTTTCTTACATGATATTACAAAGGGTGTCACCTGTTACTCACTCTGTGGGTAATTGTGTGAAGCGGGTTGTGGTGATTGTGAGCTCTGTCATCTTCTTCCAAACACCTGTTACACCCATTAACGCTTTTGGGACTGCCATAGCTCTGGCTGGCGTTTTCCTCTATTCAAGGGTGAAGCGAATTAAGCCAAAGGCCAAGACAGCATAA 1221 0.4668 MQSSAFTLSPSLPLLKSRSRAPPRFDAIRLSASSSSKPNVACSSTSSTRRSWSLASSSSPFPFRPWTSFTTLSPSDPDASPFEARAVSVPESSSEESNSMANTLVLGSLFGFWYLFNIYFNIYNKQVLKAFHYPFTITSIQFAVGSILVLFMWGFNLYKRPKISGAQLAAIVPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAMFLGEFPTPWVVGSLLPIVGGVALASVTEASFNWAGFWSAMASNLTNQSRNVLSKKVMVKKDDSMDNITLFSIITVMSFFMLAPVAVFTEGVKLTPEYLISAGLNVKQIYTRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVTPINAFGTAIALAGVFLYSRVKRIKPKAKTA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00541 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 240 - -
Accr12g00541 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 318 398 - -
Accr12g00541 406 MobiDBLite consensus disorder prediction 1 20 - -
Accr12g00541 406 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 404 IPR004696 GO:0016020|GO:0022857|GO:0055085
Accr12g00541 406 MobiDBLite consensus disorder prediction 29 59 - -
Accr12g00541 406 PANTHER SOLUTE CARRIER FAMILY 35 106 398 - -
Accr12g00541 406 Pfam Triose-phosphate Transporter family 105 394 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00541 Accr-Chr12 5040879 5044028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00541 1 406 Antiporters AT5G33320 73.544 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00541 K15283 - csav:115709322 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00182 8 2568177 2571204 Accr12g00541 12 5040879 5044028 CCT
Accr8g00182 8 2568177 2571204 Accr12g00541 12 5040879 5044028 ECH
Accr12g00541 12 5040879 5044028 Accr12g00541 12 5040879 5044028 ECH