Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00510 ATGACAACCAGATTCAAGAAGAACAGGAAGAAGAGAGGACATGTGAGTGCTGGCCATGGCCGTATCGGCAAGCACCGGAAGCATCCGGGAGGTCGAGGTAACGCCGGAGGTATGCACCATCACCGTATCCTCTTCGACAAGTACCATCCTGGTTACTTCGGTAAGGTTGGTATGCGTTACTTTCACAAGCTTCGCAACAAGTTTTATTGCCCCATTGTCAACATAGACAAGCTCTGGTCCTTGATTCCTCAAGAGGCGAAGGACAAAGCTTCCAAGGATAGCGCCCCCGTGATCGATGTCACTCAACATGGTTATTTTAAGGTTTTGGGTAAAGGAGTTTTGCCAGAGAACCAGCCTGTGGTTGTGAAGGCCAAGCTTGTGTCCAAGAATGCAGAGAAGAAGATCAAGGAGGCTGGTGGAGCTGTTGTCCTTACTGCTTAA 441 0.4921 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLWSLIPQEAKDKASKDSAPVIDVTQHGYFKVLGKGVLPENQPVVVKAKLVSKNAEKKIKEAGGAVVLTA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00510 146 FunFam 60S ribosomal protein L27a 58 146 - -
Accr12g00510 146 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 146 - -
Accr12g00510 146 ProSitePatterns Ribosomal protein L15 signature. 107 139 IPR001196 GO:0003735|GO:0005840|GO:0006412
Accr12g00510 146 Hamap 50S ribosomal protein L15 [rplO]. 1 145 IPR030878 GO:0003735|GO:0006412|GO:0015934
Accr12g00510 146 Gene3D - 58 146 - -
Accr12g00510 146 SUPERFAMILY Ribosomal proteins L15p and L18e 6 145 IPR036227 -
Accr12g00510 146 MobiDBLite consensus disorder prediction 1 35 - -
Accr12g00510 146 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00510 Accr-Chr12 4732822 4733262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00510 1 146 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 87.671 2.28e-95 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00510 K02900 - zju:107428599 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00221 8 3030738 3031178 Accr12g00510 12 4732822 4733262 CCT
Accr8g00221 8 3030738 3031178 Accr12g00510 12 4732822 4733262 ECH
Accr12g00510 12 4732822 4733262 Accr12g00510 12 4732822 4733262 ECH