Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00509 ATGGAGTCCAAACCAAGAAATCTAGAACGAACCCCTATCAAGTTCCTTTGTAGTTATGGCGGGAAGATTCTTCCTCGGGCCACAGATGGCAAGCTTCGCTACGTCGGCGGCCACACTAGAGTCCTCGCTGTTGATCGTTCTATTTCCTTTTCAGAGCTGATGGCGAAGCTTGAAGAATTGACTGGTTCATCCGTGATGTTGAGGTGTCCACTGCCCAACGGAGACTTGGAGACGTTGATTTCGATAACCAACGATGGAGATCTGGCCCAAATAATTGAGGAATATGATCGAGCTTCGTCCTCGTTAGCTCATCCGCTGAAGATCAGAGCCATTCTTTCGCCGCCGAAATCGCTCAAGAAAATATCTCCGACTTCGTCTTCTCCTTCTAGTGTGGATCAATCTCCGTCCAGATCTCTCCACAACTCCACCGAGTCCTTGCCTTACTCGATGGCCTATCGCCTTATCTGTCACAACTGCTCACCGCCGGTTGCATATCCAATCGGTGTCCGTAGCGGGAGCCCTAAGTTTTGGTACGGCGGTTACTACTGCAGCAATTACTGTCACTAA 567 0.4974 MESKPRNLERTPIKFLCSYGGKILPRATDGKLRYVGGHTRVLAVDRSISFSELMAKLEELTGSSVMLRCPLPNGDLETLISITNDGDLAQIIEEYDRASSSLAHPLKIRAILSPPKSLKKISPTSSSPSSVDQSPSRSLHNSTESLPYSMAYRLICHNCSPPVAYPIGVRSGSPKFWYGGYYCSNYCH 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00509 188 MobiDBLite consensus disorder prediction 117 141 - -
Accr12g00509 188 SMART PB1_new 27 115 IPR000270 GO:0005515
Accr12g00509 188 PANTHER OS05G0427100 PROTEIN-RELATED 3 144 - -
Accr12g00509 188 CDD PB1_UP2 16 112 - -
Accr12g00509 188 MobiDBLite consensus disorder prediction 118 141 - -
Accr12g00509 188 Pfam PB1 domain 28 99 IPR000270 GO:0005515
Accr12g00509 188 SUPERFAMILY CAD & PB1 domains 29 120 - -
Accr12g00509 188 Gene3D - 31 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00509 Accr-Chr12 4714014 4714672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00509 7 100 MAP Kinase Kinase Kinase AT5G57610 48.936 2.39e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00509 - - gmx:100810563 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00230 8 3084300 3084981 Accr12g00509 12 4714014 4714672 CCT
Accr12g00509 12 4714014 4714672 Accr12g00509 12 4714014 4714672 ECH