Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00500 ATGCTTCAGGATTCGTCCCTACAAGACTTTGATAACTCTGACTCTGAACTTGTAGAGATTGATCCCACCGGTCGATATGTTCGGTACAAGGAAGTTTTAGGGAAGGGAGCTTTCAAGAAGGTATACCGAGCTTTCGATGAGTTGGAAGGAATTGAAGTTGCATGGAATCAAATTGAAGTGGATGAACGAATGTGTAATTCTGAAGATTTGGAACGCCTGTATTCAGAAGTTCATCTGCTGAAGACTTTAAAGCATAAAAATATAATCACATTTTATAATTCATGGGTTGATCTAGAGCATGGCAACATCAACTTCATTACTGAAATATTTACTTCAGGAACATTACGCCAATACAGGAAGAAACACATGCGTGTTGACTTGAAAGCCTTAAAGAAATGGGCTAGGCAGATTTTGGAGGGGCTTTCCTATCTTCACAGTCATGATCCGCCAATTATTCATCGAGATATTAAGTCCGACAACATCTTTGTCAATGGAAATCAAGGTGAGGTGAAAATTGGTGACTTGGGACTCGCTGCCATTCTTCAGCAAGCCAATTCAGCTCATAGTTTCATAGGTACTCCGGAGTTTATGGCCCCAGAACTTTATGAAGAGGAATACAATGAGCTTGTTGACATTTATGCTTTTGGCATGTGCTTGCTAGAATTGGTAACTTTTGATTACCCATATGTTGAATGTGCAAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAGTAAAGCCAGCATCTTTGGCAAAAGTGACAGATCCTAGTGTGAAAGCATTAATAGCAAAGTGTATTGCCAATGTATCTGAACGATTATCTGCTAAGGATCTCTTAATGGATTCCTTTCTTCATTTAGACGAAGATACTGATGATATAGGTAGTTTCTTAAGGCCTAAATTTCACCATCCAGATACAAGTAGGGAATTTAGAGTGGAAGGTCAACGGAGAGATGTTAATACAATATTTCTGAAACTGGGACTAGTGGACTTCTCAGGTCATATTTGCAAGATCCACTTTCCTTTCAATATTGAGGCAGACACTCCAGTTGGGGTTGCCGGCGAAATGGTTGAGGAGCTTGAGCTCTCTAAGCAAGATGTCACGACTATTGCTAGGATGATTGAGTCAGAAATTCAAAACCACTTCCCAGTTTGGAATCCCATCCATAGCTCAGGCAAAGGGGAGGCAGTTTCAAGCAGATTTGCCTCTACTACTTTTACTGGTACTCTTGCATTGGAAAGATTACCTTCAGGTCGTAAATTCTGGTCTGATTCACCCAAGCAAGTAGTCAAAAACTCTTTTTTAAGGCCCGGTGCTTCTAATTTGTCCTCCTGTAAAGTGGAAGTGGGCACTGAGGAAAGCAACTTGACTGCAAATGATGTTGCCTCGGTTCATCAGCAGGCTAAGAACTGTGTTCATGATGGTGAGAGAAGGATTACATCTAAGGATTCAAAAGTAACCGAAGGAGGATCTCCTCTAGAAGCAGAATCTAGCATATTAAGAGATTTCGAATCAGAAAATGTCAACTTAATTGCCACAAAACTAAGAAAGTTGTTGGTGACACAGCAAGAGGACTTGAAGAAACTAAGGAAGAAACATGAATCAGCTGTCTCAGATTTTCTGAAGAAGCTTCCTTATGAAGTGCGGCAGCTGGTTTTAAATGTATATGGCCTTGAGTTACCTGAAACTGTTGATGAAGACAGATTTGAGGCCTCTTCTTCTGGTTAA 1731 0.4038 MLQDSSLQDFDNSDSELVEIDPTGRYVRYKEVLGKGAFKKVYRAFDELEGIEVAWNQIEVDERMCNSEDLERLYSEVHLLKTLKHKNIITFYNSWVDLEHGNINFITEIFTSGTLRQYRKKHMRVDLKALKKWARQILEGLSYLHSHDPPIIHRDIKSDNIFVNGNQGEVKIGDLGLAAILQQANSAHSFIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFDYPYVECANAAQIYKKVTSGVKPASLAKVTDPSVKALIAKCIANVSERLSAKDLLMDSFLHLDEDTDDIGSFLRPKFHHPDTSREFRVEGQRRDVNTIFLKLGLVDFSGHICKIHFPFNIEADTPVGVAGEMVEELELSKQDVTTIARMIESEIQNHFPVWNPIHSSGKGEAVSSRFASTTFTGTLALERLPSGRKFWSDSPKQVVKNSFLRPGASNLSSCKVEVGTEESNLTANDVASVHQQAKNCVHDGERRITSKDSKVTEGGSPLEAESSILRDFESENVNLIATKLRKLLVTQQEDLKKLRKKHESAVSDFLKKLPYEVRQLVLNVYGLELPETVDEDRFEASSSG 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00500 576 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Accr12g00500 576 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Accr12g00500 576 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Accr12g00500 576 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 339 379 IPR024678 GO:0004674|GO:0005524
Accr12g00500 576 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00500 576 Pfam Protein kinase domain 29 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00500 576 CDD STKc_WNK 25 285 - -
Accr12g00500 576 Gene3D - 333 382 - -
Accr12g00500 576 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 515 - -
Accr12g00500 576 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr12g00500 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Accr12g00500 576 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Accr12g00500 576 Coils Coil 513 533 - -
Accr12g00500 576 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00500 Accr-Chr12 4622426 4625319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00500 103 549 MAP Kinase Kinase Kinase AT3G48260 52.735 1.72e-151 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Accr12g00500 Pkinase 1.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00500 K08867 - qsa:O6P43_030822 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00500 12 4622426 4625319 Accr12g00500 12 4622426 4625319 ECH