Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00494 ATGATGGCAAGTTTTCTGACAAGTTCCATAGTGCAAGAAAACACTTCATGGTTGCTCCTTATCTTATCCATCTTCTTCATTGTGATATTCAGATGGTATTCCAACTCTGCAACCACAAAAACCTCTCTCCCTTCTCCACCAAAATTCCCAGTCATAGGAAATCTGCATCAGCTAGGTTTGTATCCTCATCGTACTCTCCACTCTCTGGCTCAGAAGTATGGCTCCTTGATGCTTCTTCATTTTGGGAAAAAACCAGTACTTGTGCTTTCTTCTGCAGAAGCTGTTCGCGAGGTAATGAAAACGCATGACCTCGTATTTGCAAACAGGCCTAAAATGAAAATGTCTGAAATACTATTATATGGAAGCAAGGATGTTGCAGCAGCTCCATATGGAGAATACTGGAGGCAGTTGAGAAGCATATCTGTGTTGCATCTTCTGAGCAACAAAAAAGTTCAATCTTTTCGCGGTGTGAGAGAGGAAGAAACTGCGATGATGATGGAAAAGATCAAGCACTCTTGTTCTGCTAACAAATCAGTGAACTTGAGTGAGTTATTTTCTTCAATTACGAACGATGTGATTTGTAGGGTGGCTTTGGGAAGGAAATATGGTGAGGAAAATGGGAGAAATTTTATGGAGATATTAGAGAAGTTTCTAGAGTTACTGGGTACTTTTGTGGTAGGAGACTATATACCTTGGCTTGATTGGCTTGGTGATGTGAATGGCTTATATGGTAGGGCACATGCAGTGGCTAAAGAGTTGGATCAATTTTTGGAGGAAGTAATCGAGGAGCACATGACTCGTCCAAGAGAAGCCGATGAGGATTTTGTGGACGTTTTGCTTTCGATTCAAAGGACAAGCTCCATTGGCTTTCCCATCGACAGATCTGTCATAAAGGCTTTGATCTTGGATATGTTTTCTGCGGGTACACATACCACAAGCACGATCTTAGAATGGACAATGACAGAGATGTTCAGGCATCCAAATGCTATGAAGAAACTACAAGACGAGGTTAGGAATGGAAAAAAAGACAGAGCATATGAAATAACAGAGGATGATATAGATCACATGCCTTACCTAAATGCAGTGTTGAAAGAAACACTTCGCTTGCACCCACCAATTCCTTTACTGGTGCCTCGAGAAAGCATGCAAGATATAAAGCTACTTGGCCATCACATCGGTGCTAAGACGCGTGTAATTGTGAATGCTTGGGCAATAGGAAGGGATCCAACATATTGGGACAACCCTCAAGAGTTTGAGCCAGAGAGGTTCTTGAATAGTTCAATAGATTATAAAGGACATGACTTTCAATTGATCCCATTTGGAGCAGGAAGAAGGGGGTGTCCTGGAACACAACTTGCAATGGTCTTAAATGAGCTTGTGATCGCAAACATTTTCTTCCATTTTGATTGGTCTCTGCCTTATGGGCTAAAAGGGAAGGACTTGGACATGTCTGAGACACTTGGCCTTACTGCTCGTAGAAAGATATCTCTCCTTGGGGTTGCGTCGCCATGTAACTAG 1518 0.4209 MMASFLTSSIVQENTSWLLLILSIFFIVIFRWYSNSATTKTSLPSPPKFPVIGNLHQLGLYPHRTLHSLAQKYGSLMLLHFGKKPVLVLSSAEAVREVMKTHDLVFANRPKMKMSEILLYGSKDVAAAPYGEYWRQLRSISVLHLLSNKKVQSFRGVREEETAMMMEKIKHSCSANKSVNLSELFSSITNDVICRVALGRKYGEENGRNFMEILEKFLELLGTFVVGDYIPWLDWLGDVNGLYGRAHAVAKELDQFLEEVIEEHMTRPREADEDFVDVLLSIQRTSSIGFPIDRSVIKALILDMFSAGTHTTSTILEWTMTEMFRHPNAMKKLQDEVRNGKKDRAYEITEDDIDHMPYLNAVLKETLRLHPPIPLLVPRESMQDIKLLGHHIGAKTRVIVNAWAIGRDPTYWDNPQEFEPERFLNSSIDYKGHDFQLIPFGAGRRGCPGTQLAMVLNELVIANIFFHFDWSLPYGLKGKDLDMSETLGLTARRKISLLGVASPCN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00494 505 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 FunFam Cytochrome P450 83B1 30 500 - -
Accr12g00494 505 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 CDD CYP71-like 72 497 - -
Accr12g00494 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Accr12g00494 505 Pfam Cytochrome P450 44 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 PANTHER CYTOCHROME P450 71B11-RELATED 28 501 - -
Accr12g00494 505 Gene3D Cytochrome P450 29 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Accr12g00494 505 SUPERFAMILY Cytochrome P450 44 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00494 Accr-Chr12 4560673 4562588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00494 40 502 Cytochrome P450 AT3G48270 53.879 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00494 - - cave:132176436 624.78