LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr12g00480	ATGATGGCTCTGCCTACTGCAAATTCACACCTCTTATTACTCTTTTCATTCTTCTCCCTTTTCTTCTTCAACCTCCATGCCAAAATCGATATCCATCCTTCAGATCTCAAAGCTTTCTTGATTTTTCACAAGGACTTGGGTTTCAATGGTCAACGCCAACCGTTTACCACTCACCCATGTGACACCGACGGCGTCTTCTGCGAGAGGAGGCTCTCCAGCAACGAGAGCTATGTTCTCAGAATCACCAGAATCATCTTCAACTCTAAGAAGCTGAATGGAGTTTTGTCCCCTGCCATTGGCCGTCTCTCTGAGCTCAAGGAGCTTTCTCTTTCGGACAACCAGCTCACGAGTCAAATTCCAACTCAGATTGTTGAGTGCCGGAAGCTGGAGATTCTTGACATCGGAAACAACCGCTTCTCCGGCGAGGTCCCATCTGAATTGTCCTCCCTCATTCGACTCCGAGTTCTTGACATATCTTCCAACAAATTCTCTGGCAATTTGAATTTCTTGAAGTATTTCCCCAACCTGGAAACTCTCTCAGTGGCAGACAACCTCTTCAAGGGGAGAATTCCAGCATCGGTTCGCTCATTTCGCAATCTCCAACACTTCAACTTTTCCGGGAATCACTTCCTTGAAATTCCTCCCCCATTGTTGAAGAAATTCGGACACTCATCTGTTATCCCCAAAAGATACATCCTCACCGAGAATTTAGCTCCGGTTCAAGCTCGGCCTCCAAAAGCCAAAAGGAACCCTTATAATAATTCAGCACTTTCAAATCCTCCGGCTCAAGCTCCAACAGCACAACACCACGAACACAAGTCAAAAAAGAGGAAACTAGGTGGATGGATTCTTGGTTTCCTAGCAGGAGCATTCGCCGGGAGCATATCAGGGTTCATATTTTGTTTGCTATTCAAGTTGGCCGTGGCTGTGATCAAAGGAGGAGGGAAGAGCTCAGGCCCTGCAATTTACAGTCCATTGATTAAAAAAGCAGAGGACTTAGCTTTTCTAGAGAAAGAAGATGGAGTAAGCTCCTTAGAAATCATCGGAAAAGGAGGATGTGGAGAAGTTTACAAGGCAGAATTACCAGGAAGCAACAAAATTATTGCTATAAAGAAGGTCGTTCAACCTTCAAAAGATGCAGTTGAACTCTCCGAAGAAGACAGTAAGCTTCTGAACAAAAAAATGCGCCAAATTCGATCAGAGATCAACACGGTCGGCCAAATTCGACACCGAAACCTACTGCCTCTACTAGCTCACGTATCCAGGCCCGATTGTCACTACCTTGTGTACGAATACATGAAGAATGGGAGCTTGCAAGATGTGTTGAATCAAGTCCAAATAGGTGTAAGAGAGTTGGATTGGTTGGCACGTCACAAGATTGCTGTTGGTGTAGCATCTGGCCTAGAGTACCTTCACATGCATCATACTCCTCGTATTATTCACAGGGATCTCAAGCCTGGGAATATTCTTCTTGATGATGACATGGAAGCTAGAATTGCAGATTTTGGGCTTGCAAAAGCAATGCCAGAAGCTTATACGCATGTCTCAACTTCAAACGTGGCTGGAACTGTGGGCTACATCGCACCAGAGTATCACCAGACTGTGAAATTCACTGATAAGTGTGACATTTACAGCTTTGGGGTTGTTCTTGGGATCTTAGTGATGGGAAAGATTCCATCTGATTCTTTCTTCCAGGAAACTGAGGAGTTGAGTTTGGTGAAGTGGATGAGGAATGTGATGACGTCAGATAATCCAACAAGAGCGATTGATGAAAAGCTCAGAGGAAATGGGTATGAGGAGCAGATGCTTCTGGTTCTTAAGATTGCTTGCTTTTGCACTCTTGATGATCCAAAAGAGAGGCCTAACAGTAAAGACATCAGATGCATGTTGTCCCAAATTAAGCACTGA	1908	0.4465	MMALPTANSHLLLLFSFFSLFFFNLHAKIDIHPSDLKAFLIFHKDLGFNGQRQPFTTHPCDTDGVFCERRLSSNESYVLRITRIIFNSKKLNGVLSPAIGRLSELKELSLSDNQLTSQIPTQIVECRKLEILDIGNNRFSGEVPSELSSLIRLRVLDISSNKFSGNLNFLKYFPNLETLSVADNLFKGRIPASVRSFRNLQHFNFSGNHFLEIPPPLLKKFGHSSVIPKRYILTENLAPVQARPPKAKRNPYNNSALSNPPAQAPTAQHHEHKSKKRKLGGWILGFLAGAFAGSISGFIFCLLFKLAVAVIKGGGKSSGPAIYSPLIKKAEDLAFLEKEDGVSSLEIIGKGGCGEVYKAELPGSNKIIAIKKVVQPSKDAVELSEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDVLNQVQIGVRELDWLARHKIAVGVASGLEYLHMHHTPRIIHRDLKPGNILLDDDMEARIADFGLAKAMPEAYTHVSTSNVAGTVGYIAPEYHQTVKFTDKCDIYSFGVVLGILVMGKIPSDSFFQETEELSLVKWMRNVMTSDNPTRAIDEKLRGNGYEEQMLLVLKIACFCTLDDPKERPNSKDIRCMLSQIKH	635

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr12g00480	635	Gene3D	Phosphorylase Kinase; domain 1	342	436	-	-
	Accr12g00480	635	PANTHER	LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1	80	634	-	-
	Accr12g00480	635	ProSiteProfiles	Protein kinase domain profile.	342	635	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr12g00480	635	SUPERFAMILY	Protein kinase-like (PK-like)	334	630	IPR011009	-
	Accr12g00480	635	FunFam	Leucine-rich repeat receptor protein kinase EMS1	73	170	-	-
	Accr12g00480	635	Coils	Coil	381	401	-	-
	Accr12g00480	635	MobiDBLite	consensus disorder prediction	251	265	-	-
	Accr12g00480	635	CDD	STKc_IRAK	348	633	-	-
	Accr12g00480	635	SUPERFAMILY	L domain-like	55	221	-	-
	Accr12g00480	635	SMART	serkin_6	342	634	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr12g00480	635	Gene3D	Ribonuclease Inhibitor	32	237	IPR032675	-
	Accr12g00480	635	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	479	491	IPR008271	GO:0004672\|GO:0006468
	Accr12g00480	635	Pfam	Leucine rich repeat	104	163	IPR001611	GO:0005515
	Accr12g00480	635	MobiDBLite	consensus disorder prediction	242	272	-	-
	Accr12g00480	635	Gene3D	Transferase(Phosphotransferase) domain 1	437	635	-	-
	Accr12g00480	635	FunFam	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1	329	432	-	-
	Accr12g00480	635	FunFam	Leucine-rich repeat receptor-like protein kinase	433	635	-	-
	Accr12g00480	635	Pfam	Protein kinase domain	344	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr12g00480	Accr-Chr12	4452852	4454759	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr12g00480	2	635	Receptor kinase-like Gene Family	AT2G31880	62.346	0.0	809

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-2	Accr12g00480		Pkinase	9.1e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr12g00480	-		-	qsa:O6P43_022621	927.546