Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00463 ATGTTTCTTCATCGTCACCTCTCTTACATGAAAACCAGACATAATAAAATTGAACAAGAGCATGCTCACGAAGTACATTGCTCAAGAGAAAGAAGTAGGGCAGCTTCTAAAATAATTGAGGAGTATTTGGTGCCATTCATGGAACGAGAAAACTATCAGCTCCCAAAAAATTGCAGACTTCATCCCGACAAAAACATATTCAGGGATCAGGAAGAGCATAAAATTCACATAGATATAAATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTCCGTGCTGAAAAATTTCTTGATCAGCATTTTGATAACAGACACTACAATCTTCTAAATGTAAGTCATGGCAAGTGTATGGCTGATTTATGCGGGGCATTGCATTGTGATGCTGTGATTTATACCAAGACCTCTAAAACCAAGTGTAATCCCGCAGCTGCTGGGAGAAATCGTCACCTATGTGAGAGCCTTGCAGATAGTTGTTTTCCCTTAAATGGGGTTCCCTCAGCAATCCGTCTTCATGAATTGTTTCTGCACCAATTTTGTGACGCCCACACCTGCTCAGGGAAACAGAAACCCTTCGTTAGAGGTGGCAGGAAGCAAAAGAGTATCTTCTATTTGGCTACTGGAGCATTGACCTTGGTGCTACTTCCTGTGTTTTATCTTTTTGTTTATATCATACAAAGAGATATGAGGAGTCGAACTCAAGAGCTTCGGCGCATTATAAAAGTGGGGCGAAAAACAAAACCGTTGTGA 747 0.407 MFLHRHLSYMKTRHNKIEQEHAHEVHCSRERSRAASKIIEEYLVPFMERENYQLPKNCRLHPDKNIFRDQEEHKIHIDINEWRCGYCKKSFRAEKFLDQHFDNRHYNLLNVSHGKCMADLCGALHCDAVIYTKTSKTKCNPAAAGRNRHLCESLADSCFPLNGVPSAIRLHELFLHQFCDAHTCSGKQKPFVRGGRKQKSIFYLATGALTLVLLPVFYLFVYIIQRDMRSRTQELRRIIKVGRKTKPL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00463 248 PANTHER ZINC FINGER PROTEIN-RELATED 11 246 - -
Accr12g00463 248 ProSitePatterns Zinc finger C2H2 type domain signature. 84 105 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00463 Accr-Chr12 4287099 4289680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00463 16 247 C2H2 Transcription Factor Family AT5G63280 65.517 1.41e-112 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr12g00463 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00463 - - qlo:115965875 397.512