Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00462 ATGAAGAAGGCCACAACAATCACTTCAATTTTCATCATCTTATTAACGATTTCCGTTGAGACCGTCAATGTTTCTTCATCGTCACCTCTCTTACATGAAAACCAGGTTTATGAGGAATCTGCTGGTGGAAGACATAATAAAATTGAACAAGAGCATGCTCACGAAGTACATTGCTCAAGAGAAAGAAGTAGGGCAGCTTCTAAAATAATTGAGGAGTATTTGGTGCCATTCATGGAACGAGAAAACTATCAGCTCCCAAAAAATTGCAGACTTCATCCCGACAAAAACATATTCAGGGATCAGGAAGAGCATAAAATTCACATAGATATAAATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTCCGTGCTGAAAAATTTCTTGATCAGCATTTTGATAACAGACACTACAATCTTCTAAATGTAAGTCATGGCAAGTGTATGGCTGATTTATGCGGGGCATTGCATTGTGATGCTGTGATTTATACCAAGACCTCTAAAACCAAGTGTAATCCCGCAGCTGCTGGGAGAAATCGTCACCTATGTGAGAGCCTTGCAGATAGTTGTTTTCCCTTAAATGGGGTTCCCTCAGCAATCCGTCTTCATGAATTGTTTCTGCACCAATTTTGTGACGCCCACACCTGCTCAGGGAAACAGAAACCCTTCGTTAGAGGTGGCAGGAAGCAAAAGAGTATCTTCTATTTGGCTACTGGAGCATTGACCTTGGTGCTACTTCCTGTGTTTTATCTTTTTGTTTATATCATACAAAGAGATATGAGGAGTCGAACTCAAGAGCTTCGGCGCATTATAAAAGTGGGGCGAAAAACAAAACCGTTGTGA 840 0.406 MKKATTITSIFIILLTISVETVNVSSSSPLLHENQVYEESAGGRHNKIEQEHAHEVHCSRERSRAASKIIEEYLVPFMERENYQLPKNCRLHPDKNIFRDQEEHKIHIDINEWRCGYCKKSFRAEKFLDQHFDNRHYNLLNVSHGKCMADLCGALHCDAVIYTKTSKTKCNPAAAGRNRHLCESLADSCFPLNGVPSAIRLHELFLHQFCDAHTCSGKQKPFVRGGRKQKSIFYLATGALTLVLLPVFYLFVYIIQRDMRSRTQELRRIIKVGRKTKPL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00462 279 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
Accr12g00462 279 PANTHER ZINC FINGER PROTEIN-RELATED 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00462 Accr-Chr12 4287099 4289747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00462 34 278 C2H2 Transcription Factor Family AT5G63280 63.563 2.09e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr12g00462 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00462 - - qsa:O6P43_022597 426.017