Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00455 ATGTATCCTCCTCTTTATAGGTTCGTCAAGGATGAGATTAATGAAGACGAAAATTCAGTACTAGGCCTCAGTCTTCGACTCGCAACAATGGTTTGCCACACTTATCCTCGTACTCCCACCTGGGACAACATTGCTGCTTCCCCTTGGATCCTTCCTCGTTCTGATGATGATGAAACCAAGAGGGACATAAAAATGTTCAAGAGAACCATAAGCATGTCCGATGTTACACGTGGCAGCTACAGTAGTAGTATGAATAGCGTGCCAAGGCTTCGATTCAGAGATCACATATGGACTTACACTCAGACGTACCGTGCAGCTGAAGCGATTGAAGAGGCTGCAAAAGAGATGATGATGAGGGATGAAGCTGAGAAAGAAGGATGTGCTGACGAAATGAGATTTGTTCAACTTCTAATTGCTTGCGCAGAAGCCGTGGCTTGTCGTGACAAATCACACGCTTCTAATTTATTATCTCAACTTGAAGCCAATTATGCTTTAGTGTTCGGTTCTTCTTTCCAAAGAGTCGCTTCTTGTTTCGTCCGTGGCCTAGCTCATCGTCTTGCCATGATTCAACCTATTGGGGCTGCTGAGGAATCTAATAAACCCCCTATAATGAACATTATGGATACAGCTTCTGAAAATATGCAAGAAGCTTATAAATTAATGTACGAGATTTGCCCACATATTCAGTTTGGTCACTTTGTGGCTAACTCCACAATATCGGAAGCCTTTGAGAGTCAGGGTACTTTTCTTCATATCGTTGACTTGGGGATGAGCCTTGCTCTGCCACATGGACACCAATGGCGAGGACTGATCCACGGTCTCGCTAACCGCGCCGCCGGCCACCCTCTTGTTCGCCGTCTTCGAATCACCGGGGTTGGACTCTGTATTGAGAGACTCCAGAGCATAGGTGAAGAACTCGAGGTTTATGCAAAAAATCAGGGGATCAATCTGGAATTCTCAGCTGTTCATAAAAGCTTGGAAAATTTGCATCCTGATGATATCAAAGTTTATGAGGGTGAAATTCTTGTTGTGAACAGTGTTTTTCAGTTGCATTGTGTGGTGAAAGAAAGTCGTGGAGCTTTGAACTCTGTGCTTCAGGTGATCCATAAGCTGTCACCAAAAGTGTTTGTTATGGTGGAGCAGGACTCGAGCCATAACGGACCCTTCTTTCTTGGGAGATTTATGGAAGCTCTGCATTATTACTCTGCAATTTTTGATTCACTTGATGCTGCGTTGCCTAAGTATGACACGAAGAGGGCTAAGATAGAACAGTTTTATTTTGCTGAGGAGATAAAGAACATAGTGAGCTATGAGGGGCCGGTGAGGGTGGAGAGGCATGAGAGGCTGGAGCAGTGGCGGAGGAGGATGAGCAGGGCCGGGTTTCAGGCGGCGCCGATCAAGGCGGTGGCTCAGGCCAAGCAGTGGCTTCGCAAGAAAGAGGTGAGTGATGGATATACGGTTGTGGAAGAGAAAGGATGCTTGGTTCTTGGTTGGAAATCAAAGCCAATTGTTGCAGTTTCTTGCTGGAAATGCTAA 1536 0.457 MYPPLYRFVKDEINEDENSVLGLSLRLATMVCHTYPRTPTWDNIAASPWILPRSDDDETKRDIKMFKRTISMSDVTRGSYSSSMNSVPRLRFRDHIWTYTQTYRAAEAIEEAAKEMMMRDEAEKEGCADEMRFVQLLIACAEAVACRDKSHASNLLSQLEANYALVFGSSFQRVASCFVRGLAHRLAMIQPIGAAEESNKPPIMNIMDTASENMQEAYKLMYEICPHIQFGHFVANSTISEAFESQGTFLHIVDLGMSLALPHGHQWRGLIHGLANRAAGHPLVRRLRITGVGLCIERLQSIGEELEVYAKNQGINLEFSAVHKSLENLHPDDIKVYEGEILVVNSVFQLHCVVKESRGALNSVLQVIHKLSPKVFVMVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAALPKYDTKRAKIEQFYFAEEIKNIVSYEGPVRVERHERLEQWRRRMSRAGFQAAPIKAVAQAKQWLRKKEVSDGYTVVEEKGCLVLGWKSKPIVAVSCWKC 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00455 511 Coils Coil 105 125 - -
Accr12g00455 511 Pfam GRAS domain family 134 510 IPR005202 -
Accr12g00455 511 ProSiteProfiles GRAS family profile. 124 510 IPR005202 -
Accr12g00455 511 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 113 505 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00455 Accr-Chr12 4209111 4210646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00455 131 510 GRAS Transcription Factor Family AT1G66350 35.844 6.62e-71 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr12g00455 GRAS 4.8e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00455 - - pop:7463101 660.218