Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00447 ATGGCGAACCAGGTAGATCCCAGCTCAGGCTTTTGCCCTCAAACCAGAACATTCCATAGTCTTCGTCCGGACGTCCCTCTCCCTCCACCCTCTCAACCTCTCTCCATCACGGACTACGCTCTTTCTCTCATCCCTCAGACCGCTTCCTCCACCACTGTCCTCATCGACTACGACGCCGACCGCCGCGTCTCCTACTCCCTCTTTCTTCAACAAATCAAAAACCTCGCTTCCTCCCTCGCTTACCTCACCCCTCTTTCTAAAGGCCACGTCGCCTTCATTCTTTCCCCTGCTTCTCTTCACATCCCAGTTCTGTACTACTCCCTCTTGTCTTTAGGAGTCACCATCTCACCCGCTAACCCTATGGGCTCTGAATCGGAGGTCGCTCATCAGGTTGAGCTCGCTCAACCTGTCATCGCATTCGCTACCTCCTCCATTGCTCACAAGATCCCTAAGCTTCGATACGGTACCGTCATAATCGACTCTCCTCAGTTCCTTTCCATGACCAATGGAACTTCCGGAAGTGGTAATGCTGATAACAGGGGCGTCCGAAGAGTTCAGATAAGCCAATCAGAGCCGGCGGCGATTCTCTTCTCATCTGGAACAACCGGAAGAGTGAAGGGTGTGTTATTGACTCACAGGAATTTGATTGCCCTAATTGGGGGATTTTACCACCTGAGGCACCTGATGTATTCTCCAGAGAATGAACCTGATCCGGTGTCCCTATTCACGCTGCCACTTTTCCATGTGTTTGGGTTTTTCATGCTGATTAGGGCGATATCGATGGGGGAGACTCTGGTTTTGATGCAGAGGTTCGATTTCGAAGGGATGTTAAAGGCGGTAGAAAGGTACAAGATTACGTACATGCCAGTTTCGCCGCCGCTTATTGTGGCGCTGGCTAAGTCGGAGTTAGTGAAAAAGTACGACCTTAGCTCGATGAGGTTGCTCGGGTGCGGCGGCGCGCCGCTTGGCAAGGAGGTGGCCGAGAACTTCCATGCCAGATTCCCTGATGTGGAAGTAGTGCAGGGGTATGGCCTGACTGAAAGTGGAGGCGGGGCAACGAGAATGATAGGGCCTGAAGAGGCTAAGCGTCATGGCTCTGTAGGTCGACTCGCAGAGAATATGGAAGCCAAGATTGTGGATCCTGTGACAGGAGAGTCATTGCCTCCTGGTCAGAGAGGGGAACTATGGTTGAAAGGTCCAACCATAATGAAAGGTTATGTAAGAAATGAGGAAGCAACGGCTGAGACATTGGATCCGGAGGGATGGCTCAAGACTGGAGATCTTTGTTATTTTGATTCTGATGGTTTCCTCTACATTGTAGACAGGCTTAAGGAATTGATTAAATACAAAGCATATCAGGTTCCTCCAGCTGAACTGGAACATATACTTCACACCCACCCTGATATTGCTGATGCTGCCGTAGTTCCGTACCCTGATGAAGAGGCAGGGCAAATTCCAATGGCATTTGTGGTAAGAAAGCCTGGAAGCAATATCAACGCAGATGAGGTTATGGATTATGTGGCAAAGCAGGTTGCGCCATACAAGAAGATACGACGTGTTGCTTTCATTAATGCTATACCAAAGAATCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTCGATTCTGCACTATCAAGTGGTTCCTCCAAATTGTAA 1656 0.4964 MANQVDPSSGFCPQTRTFHSLRPDVPLPPPSQPLSITDYALSLIPQTASSTTVLIDYDADRRVSYSLFLQQIKNLASSLAYLTPLSKGHVAFILSPASLHIPVLYYSLLSLGVTISPANPMGSESEVAHQVELAQPVIAFATSSIAHKIPKLRYGTVIIDSPQFLSMTNGTSGSGNADNRGVRRVQISQSEPAAILFSSGTTGRVKGVLLTHRNLIALIGGFYHLRHLMYSPENEPDPVSLFTLPLFHVFGFFMLIRAISMGETLVLMQRFDFEGMLKAVERYKITYMPVSPPLIVALAKSELVKKYDLSSMRLLGCGGAPLGKEVAENFHARFPDVEVVQGYGLTESGGGATRMIGPEEAKRHGSVGRLAENMEAKIVDPVTGESLPPGQRGELWLKGPTIMKGYVRNEEATAETLDPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTHPDIADAAVVPYPDEEAGQIPMAFVVRKPGSNINADEVMDYVAKQVAPYKKIRRVAFINAIPKNPAGKILRRELVDSALSSGSSKL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00447 551 FunFam 4-coumarate--CoA ligase 2 445 546 - -
Accr12g00447 551 Pfam AMP-binding enzyme 50 449 IPR000873 -
Accr12g00447 551 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Accr12g00447 551 SUPERFAMILY Acetyl-CoA synthetase-like 49 543 - -
Accr12g00447 551 Gene3D - 445 545 IPR045851 -
Accr12g00447 551 CDD 4CL 49 539 - -
Accr12g00447 551 Gene3D - 18 444 IPR042099 -
Accr12g00447 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 541 - -
Accr12g00447 551 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00447 Accr-Chr12 4113410 4116300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00447 5 551 Monolignol Biosynthesis Gene Families AT5G63380 64.171 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00447 K01904 - qsa:O6P43_022573 858.211