Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00446 ATGGCGAACCGATCTCAAACGAAGCCTAAACTCACCGGCGTCGACCCAAACTCCGGCTTTTGCCATTCAACCAGAATATTCCATAGCCTCCGTCCTGAGATCCCTGTTCCTCCTCCCTCACAACCTCTCTCCGTCACTGACTTCGCATTCTCTTTCCTACCTTCTGTTGCTTCCTCCGCCACCGTCCTCGTTGACTCCGTCACCGGCCACCACCTGTCCGACTCCCTCTTCCTTCAGCAAGTCAAAAACCTCTCTTCCTCCCTCGCTTCCCTCACACCTCTCTCCAGAGGCGACGTGGCCTTCATTCTCTCGCCTTCTTCCCTGCAAATTTCCGTTCTATATTTCTCTCTCTTATCTCTAGGAATCATCACCTCACCCGCTAACACGCTCAGCTCTGACTCGGAGGTGGCTCACATGGTTCGACTCAGTCAACCCGTGATCGCGTTCGCCACCTCCTCGACTGCCCACAAGATCCCTAACCTTCAATACGGCACCGTATTGCTTGACTCCCCTCAGTTCGTCTCCATGATTAATGGACTTCACGGAAGTGATAAAAACAGGGGAAGCGACAGAGTTGAGGTGAGTCAACCCGACACGGCGGCGATTCTCTTCTCTTCGGGAACCACAGGCCGAGTCAAGGGAGTTGAGTTGACTCACAGGAATTTTATTTCAGTCATTTGTGATATATACTACTCGAGGCAGCTGGATATGAATGGCGAAGAACGCCGTGTGTACCTGTTTCCGTTGCCTCTGTTTCACGTGTTTGGTTTTTTAATGTTGCTTTCGTCGGTGGCATCAGGGGACACCATAGTTTTGATGCAGAGGTTCGATTTTGAGGGGATGCTGAAGGTTGTAGAGAAATACAAAATTACGAGCATGCCGGTGTCGCCGCCACTTGTGGTGGCTCTGACTAAGTCGGAGTTGGTAAAGAAGTACGACCTGAGCTCGCTTCGAACTGTCGGGTGCGGCGGCGCTCCGCTTGGCAAGGAGGTGGCAGAAAATTTCAAAGTCAAATTTCCTAACGTGGAGATTGGCGAGGGCTATGGTTTGACTGAGAGCTCAGGTTTAGCGGCAAGAATGATAGGGCCTGAAGAGACTAAGCGTCACAGTTCAGTGGGTCGGCTACAGAATAAATTTGAAGCAAAAATAGTGGATCCTGTGTCCGGAGAAGCATTGCCTCCTGGCAACAAAGGAGAGTTGTGGTTGCGAAGTCCTACAATTATGAAAGGATATGTAGGAGATGAGAAGGCCACGACTGAGACATTGGATTCAGAAGGATGGCTGAAGACTGGTGATCTTTGTTACTTTGATTCTGAGGGCTTCCTCTATATTGTCGACAGGTTAAAGGAGCTCATTAAATACAAAGCTTACCAGGTTGCCCCAGCTGAGTTGGAACTTCTACTTCTCTCCAATCCTGAAATTGTTGATGCTGCTGTAATTCCTTATCCAGATGAAGATGCAGGACAAATACCAATGGCCTTTGTGGTCAGAAAATCAGGAAGCAATATTACTGCGTCTGAGGTCACGGATTTTGTGGCAAAGCAGGTGGCGCCATACAAGAAAATAAGGCGGCTATCATTTGCGAACAGTATTCCAAAATCTGCATCTGGCAAAATATTGAGAAGGGAATTAGTTGCTCGCGCCCTCTCTGCTGCTTCCTCCAAATTGTGA 1671 0.4919 MANRSQTKPKLTGVDPNSGFCHSTRIFHSLRPEIPVPPPSQPLSVTDFAFSFLPSVASSATVLVDSVTGHHLSDSLFLQQVKNLSSSLASLTPLSRGDVAFILSPSSLQISVLYFSLLSLGIITSPANTLSSDSEVAHMVRLSQPVIAFATSSTAHKIPNLQYGTVLLDSPQFVSMINGLHGSDKNRGSDRVEVSQPDTAAILFSSGTTGRVKGVELTHRNFISVICDIYYSRQLDMNGEERRVYLFPLPLFHVFGFLMLLSSVASGDTIVLMQRFDFEGMLKVVEKYKITSMPVSPPLVVALTKSELVKKYDLSSLRTVGCGGAPLGKEVAENFKVKFPNVEIGEGYGLTESSGLAARMIGPEETKRHSSVGRLQNKFEAKIVDPVSGEALPPGNKGELWLRSPTIMKGYVGDEKATTETLDSEGWLKTGDLCYFDSEGFLYIVDRLKELIKYKAYQVAPAELELLLLSNPEIVDAAVIPYPDEDAGQIPMAFVVRKSGSNITASEVTDFVAKQVAPYKKIRRLSFANSIPKSASGKILRRELVARALSAASSKL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00446 556 FunFam 4-coumarate--CoA ligase 2 450 551 - -
Accr12g00446 556 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Accr12g00446 556 SUPERFAMILY Acetyl-CoA synthetase-like 71 550 - -
Accr12g00446 556 Pfam AMP-binding enzyme 60 454 IPR000873 -
Accr12g00446 556 Gene3D - 450 551 IPR045851 -
Accr12g00446 556 Pfam AMP-binding enzyme C-terminal domain 463 538 IPR025110 -
Accr12g00446 556 Gene3D - 25 449 IPR042099 -
Accr12g00446 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 545 - -
Accr12g00446 556 CDD 4CL 37 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00446 Accr-Chr12 4085222 4087796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00446 14 556 Monolignol Biosynthesis Gene Families AT5G63380 59.279 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00446 K01904 - qsa:O6P43_022573 765.377