Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00421 ATGGAATGCAAAGAAGAGGATGCCAAGAAGGCTAAAGAGCTTGCTGAGAAGAAGATTTTAGAGATGGATGCTATCGGCGCAAAAATGTTAGCCCTAAAGGCTCAAGACTTGTGTCCTAATCTCGGTGGTCTTCCTCAACTGCTAGCAACAATTGAGGTTTATGTCTCTGCTGAAAAAAGAATAAATGGGGAAGTTGATTGGCATAGGGTTCTCGGAGTGGACCCAATGGCTGATGATGAAACTATTCGAAGCTGTTATAAGAAACAGGCTCTAACACTACACCCTGATAAAAACAAATCAATTGGTGCAGATGGGGCTTTTAGCCTAATCTCTCAAGCATGGAATTTGCTGTCCAACAAAGCAAAGAAAATCTTCTATGACAAAAAATGCAAACATGGTTTCGATAGTGCTAAGTGGAAAGATAGAGACCCCAGAAGTTCTGCTCATCCCAACCCTCCTCACATACCTCCTGTGACTCCAAAGCATACGTTTTGGACGATGTGCCCTTCTTGCAGGGTATATCTTGAGTACGCTCTAGCTTATGTTAACTGGAGTTTAGTATGCCCGTCATGCAATACGCGCTACATAGGTCTTGAGGTGCCGAACCCGTCTATACACAGGAATACTCCATCCACCTCAAAAGGAAGAATGAAGAAAACTCCTGCCAAGCACTCATCAAAAAGACAGTATAGATCAGGTTCTAATGATATTAGGGTATCGTCTGAGAATTTGAAGAGAGGGCATGAAGATAAAGCACCTCCTGTCATGATGGAGGAACCCCGTTTTGGGAAAAATCAAGCTGTAAAGACAACTGATGCTGATTCAACTTTTCAATCCTCTTGTTTTGGCTACGATTCTGTTCCAAAAAGAGACAAGGCAAAGAAAAAGAGACACCTAGATAAGTGCAGAGAGGATAATGACAGAAAGGAGATGAGTGTTCCAGACCCAGACTTTCATGATTTTGACAATGGCCGCACAGAAAAAGCCTTTGGTGAGAATCAGGTGTGGGCTGTTTATGACGACGATGATGGCATGCCTCGTTACTATGTTTTGATCCATGATGTAATTTCTCTAAAACCCTTCAAAATGAAGATTAGTTGGCTTAACTCCAAAAGCAATGATGAACTGGCTCCAATAAAGTGGATTGGTTCTGGCTTTCCCAAGACTAGTGGTGATTTCCGGATAGGCAAGCATGAACTTAATGGATCTGTTAACTCTTTCTCTCATAGAGTTAAGTGGGAGAGAGGCCTAAGAGGAGTTATAAATATATATCCAAAGAAGGGGGATGTTTGGGCTCTATATAGGAACTGGTCTCCTGATTGGAATGAACTGACTCCTGATGAAATCATACATAAATACGACATGGTTGAAGTACTTGACGACTACAATGAGGAACAAGGTGTGGATGTTGCTCTGCTTGTTAAAGTTGCAGGTTTCAAGGCAGTGTTCCGCCGGCATGTTGATCCTAGAAATATCTGGAATATTCCCAGGGCTGAGATGTTTCGTCTGTCACACCAGGTTCCTTCATACTTGCTCACTGGTCGAGAAAGTGTTAATGCTCCTAGAGGTTGCTTGGAGCTTGATCCTGCTGCTTTACCTATGGAACTTCTTCAGGTGTTAACCGAAGAACAGGAGCTGGGAACAGGAATGAAGATCGAAAAATCTTCAGAAGATACAATGGAGCCTGGACAGAATTCTAAAGAAAATGAGGAGGTCAAGACGTTTCAGATAGAGAAGGAAAAAGATTCTGTAGAAGATATTTCAAGGGAAGCAGTGCCTGAAGCAATGAAAAAGAAGAGAAATATGACACGGAATTTGATTGTGTATAAGAGGAGACGTATGGGGGAAAACAGAGGTGTAACGAGGCAAGTAGTTTGTTAG 1881 0.4226 MECKEEDAKKAKELAEKKILEMDAIGAKMLALKAQDLCPNLGGLPQLLATIEVYVSAEKRINGEVDWHRVLGVDPMADDETIRSCYKKQALTLHPDKNKSIGADGAFSLISQAWNLLSNKAKKIFYDKKCKHGFDSAKWKDRDPRSSAHPNPPHIPPVTPKHTFWTMCPSCRVYLEYALAYVNWSLVCPSCNTRYIGLEVPNPSIHRNTPSTSKGRMKKTPAKHSSKRQYRSGSNDIRVSSENLKRGHEDKAPPVMMEEPRFGKNQAVKTTDADSTFQSSCFGYDSVPKRDKAKKKRHLDKCREDNDRKEMSVPDPDFHDFDNGRTEKAFGENQVWAVYDDDDGMPRYYVLIHDVISLKPFKMKISWLNSKSNDELAPIKWIGSGFPKTSGDFRIGKHELNGSVNSFSHRVKWERGLRGVINIYPKKGDVWALYRNWSPDWNELTPDEIIHKYDMVEVLDDYNEEQGVDVALLVKVAGFKAVFRRHVDPRNIWNIPRAEMFRLSHQVPSYLLTGRESVNAPRGCLELDPAALPMELLQVLTEEQELGTGMKIEKSSEDTMEPGQNSKENEEVKTFQIEKEKDSVEDISREAVPEAMKKKRNMTRNLIVYKRRRMGENRGVTRQVVC 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00421 626 Coils Coil 1 21 - -
Accr12g00421 626 Pfam Domain of unknown function (DUF3444) 309 516 IPR024593 -
Accr12g00421 626 MobiDBLite consensus disorder prediction 578 598 - -
Accr12g00421 626 PANTHER BNAC03G44070D PROTEIN 1 533 - -
Accr12g00421 626 MobiDBLite consensus disorder prediction 202 256 - -
Accr12g00421 626 SUPERFAMILY Chaperone J-domain 61 126 IPR036869 -
Accr12g00421 626 MobiDBLite consensus disorder prediction 137 159 - -
Accr12g00421 626 SMART dnaj_3 65 122 IPR001623 -
Accr12g00421 626 MobiDBLite consensus disorder prediction 554 573 - -
Accr12g00421 626 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Accr12g00421 626 PRINTS DnaJ domain signature 102 122 IPR001623 -
Accr12g00421 626 PRINTS DnaJ domain signature 68 86 IPR001623 -
Accr12g00421 626 PRINTS DnaJ domain signature 86 101 IPR001623 -
Accr12g00421 626 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Accr12g00421 626 MobiDBLite consensus disorder prediction 241 256 - -
Accr12g00421 626 CDD DnaJ 66 119 IPR001623 -
Accr12g00421 626 Pfam DnaJ domain 66 127 IPR001623 -
Accr12g00421 626 Gene3D DnaJ domain 54 148 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00421 Accr-Chr12 3880653 3882533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00421 7 201 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.851 1.73e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00421 - - han:110941721 503.827