Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00393 ATGGAAAATACAAAAGATTCAAACTTTGAGCTTGAAGTGAAGCTAGGAGAACCAGTTCCGGTTCCACCAGCAGAAGAAACAGACAAGGGTCTTTACTTCCTTTCAAACTTGGACCAGAACATAGCAGTTCCAGTTCGTACAGTTTATTGTTTCAAATCTGCTTCTCGAGGCAACGAGGATGCTGCAACAGTTATCAGACAAGCCTTGTCCAAGATTCTTGTTCCTTATCATCCCATGGCTGGCAGGTTAATTATCAGTTCAGAAGGCAAGTTGATAGTTGATTGTACTGGTGAAGGAGCAGTGTTTGTTGAGGCTGAAGCAAACTGTGAGATAGAAAAGATTGGAGACTTAACAAAGCCTGATCCTTCAACTCTTGGCAAATTGGCTTATAGCGTCCCTGGTGCCAACACCATACTTGAGATGCCTCTTATGACTGTTCAGGTGACAAGATTCAAATGTGGAGGCTTTACTTTGGGGCTGGCCATGATCCACTGTATGAAAGATGGACTGTGTGCCATGGAATTTATAAACGCATGGAGTGACACAGCAAGAGGCTTAGACTTAAAGACTCGTCCATTTCTTGATCGAACCATACTCAAAGCACGTGACCCTCCTCTTATAGAGTTTCCCCACCATGAATTTGCACAGATTGAAGACATATCAGATACCTCAAAAGTATACGAGGAAGAAGAAGTGCTCTACAAATCCTTCTGTTTCGATCCAAACAAGCTTGATCATCTCAAGAAAAAGGCCATGGAAGATGGGATTCTTCAAAAGTGCTCAACTTTTGAAGCCCTGTCTGGTTTTGTATGGAGAGCTCGAACTGAAGCCTTGAAGATGAAACCTGATCAACAAACCAAGCTTCTTTTTGCTGTTGATGGACGGTCCAGATTCGTTCCTCCAATACCAGAAGGTTACTTTGGAAACGCCATAGTGTTGACAAATTCATTGTGTGAAGCAGGCGAGTTAATGAGAAATCCTCTGTCTTTCACAGTTGGGTTGGTTCAAAAGGCGATTGATATGGTTACAGATAGGTATATGAGATCTGCTATAGACTATTTTGAAGTGACAAGAGCAAGGCCTTCCTTAACAGCAACACTTTTGATTACAACTTGGACTAGGTTGTCTTTTCACATAACAGATTTTGGATGGGGACAACCTCTGTGTTCTGGGCCTGTGACCTTGCCTGAGAAAGAGGTCGTAGTGTTCCTATCTCAAGGGGATGAGAGGAAGAACATAAATGTTCTTCTGGGTTTGCCTGCTTCTGCCATGGAAATCTTTGAAGCACTCGTCATGCAGTTATGA 1305 0.4276 MENTKDSNFELEVKLGEPVPVPPAEETDKGLYFLSNLDQNIAVPVRTVYCFKSASRGNEDAATVIRQALSKILVPYHPMAGRLIISSEGKLIVDCTGEGAVFVEAEANCEIEKIGDLTKPDPSTLGKLAYSVPGANTILEMPLMTVQVTRFKCGGFTLGLAMIHCMKDGLCAMEFINAWSDTARGLDLKTRPFLDRTILKARDPPLIEFPHHEFAQIEDISDTSKVYEEEEVLYKSFCFDPNKLDHLKKKAMEDGILQKCSTFEALSGFVWRARTEALKMKPDQQTKLLFAVDGRSRFVPPIPEGYFGNAIVLTNSLCEAGELMRNPLSFTVGLVQKAIDMVTDRYMRSAIDYFEVTRARPSLTATLLITTWTRLSFHITDFGWGQPLCSGPVTLPEKEVVVFLSQGDERKNINVLLGLPASAMEIFEALVMQL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00393 434 Pfam Transferase family 21 428 - -
Accr12g00393 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 429 - -
Accr12g00393 434 Gene3D - 8 215 IPR023213 -
Accr12g00393 434 Gene3D - 216 433 IPR023213 -
Accr12g00393 434 FunFam Spermidine hydroxycinnamoyl transferase 11 214 - -
Accr12g00393 434 FunFam Tryptamine hydroxycinnamoyl transferase 218 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00393 Accr-Chr12 3698608 3700538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00393 11 434 Monolignol Biosynthesis Gene Families AT5G48930 36.425 4.81e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00393 K15400 - gmx:100794490 723.776