Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00392 ATGGAGGTTTCGAAGGAGAGACGGGAGAGAAACCTGATCGTGAAGGCATGGCAACGTTGGGTTACTTGGGCGTCAAGAAAGAAAGCCGAAAAGGGTTGTTTCTCAGTGTATGTTGGAGAAGAGAGAAAGAGGTTTAAGGTGAAGACGGAGTTAGTGAATCACCCACAGTTCAAGAAACTTCTAGATGATGCAGAAATGGAATATGGGTTTGTAAATGGTCCTATATGGCTTCCTTGTAGCGTGGAGTTGTTCTTCAACGTGATGGCAGAGATAATGGTCGCAAAAGAAGAAGAAGAAGAAGAAAGTACAGTAAGTGGAAGAGGCTCATCAAAGGGTTATTCTTCTTCTTCGTTTGCTCTGTGTAGTCCTTCTCGTCTTCTTTTCAATTTGAATCCTTGTTATGATGATCATCAAGACGGTGATGATAAGCCTCCTTGTGCTTATCAATTGCTTGGGGTTGATCCTCACTCCTCGAAGTAA 480 0.4292 MEVSKERRERNLIVKAWQRWVTWASRKKAEKGCFSVYVGEERKRFKVKTELVNHPQFKKLLDDAEMEYGFVNGPIWLPCSVELFFNVMAEIMVAKEEEEEESTVSGRGSSKGYSSSSFALCSPSRLLFNLNPCYDDHQDGDDKPPCAYQLLGVDPHSSK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00392 159 Pfam Auxin responsive protein 19 89 IPR003676 GO:0009733
Accr12g00392 159 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 86 IPR003676 GO:0009733
Accr12g00392 159 MobiDBLite consensus disorder prediction 96 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00392 Accr-Chr12 3668918 3669397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00392 13 122 Calmodulin-binding Proteins AT4G34750 34.483 1.44e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00392 K14488 - dcr:108226129 107.071