Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr12g00381 | ATGCATTTCGCTAAACTTGATGATTCGCCAATGTTTCGGCAACAGCTGCAATGCTTGGAAGAAGGTGTAGATTCACTACGAGGAAGATGCCTAAAATTCTACAAAGGATGTCGAAAGTACACGGAAGGTCTTGGAGAGGGATATGATGGGGACATTGCTTTTGCGAGTGCCCTTGAAACTTTTGGGGGAGGGCACGGTGATCCTCTTTTTGTTGCTTTGGGAGGACCTGTTATGACCAAATTCACTATTGCTTTGAGAGAAATTGGTACCTACAAAGAAGTTCTACGGTCGCAGGTGGAGCACATGCTTAGTGACCGGTTGTTACACATTCTCAATGTTGACATCATTGATGTGAAGGAAGCTCGAAAGCGGTTTGACAAGGCTTCCCTTGTATATGATCAGGCACGCGATAAGTTTCTGTCATTGAGAAAGAGTACTAGGATGGATGTTGCTACTGCCATCGAAGAGGAATGGCACAGTGCAAGAGATTCATTTGAGGAAGCCCGTTGCAATCTGGTTAGTGCTCTAAACAATGTTGAGGCCAAGAAGAGATTTGAATTTTTAGAGGCTGTCAGTGGAATTATGGATGCTCATCTTCGATACTTTCAACAGGGATACCAGCTATTGCATCAGATGGAACCTTTCATTACGGAGGTCCTGGCTTATGCACAGCAATCAAGAGAAAGTTACAATACGGATCAGATCTCTCTAAATGAAAAAATGCAAGAGTTCAAACGACAAATTCACCAAGAAAGTAGATTGTCTTTAAATGGTCCCCATGGTTCTCCTGGAGAATGTGCACAGCCTTTTTCTAGGATATCAAATGAAGTGGTAGATGCAGTCAAAGAATCTGCTGCAAATGGGAAGGTTCAAATCATTCGACAAGGATTTCTTTCAAAACGCTCTTCCAATCTGAGGGGTGACTGGAAGAGAAGGTATTTTGTTCTTGATAGTCGAGGAATGCTGTTCTATTATCGCAAACCATGGAACTTGGCACATAATAGCAATCCACCATCTTTACAGAGAAATAATGCCAATGAAAATGGTCATGGACTTCTGAGCCGGTGGCTTTCTTCTCATTATCACGGGGGAGTCCATGATGAGCGATCTGTTGCACGCCATGCAGTGAACCTGCTTACATCAACAATCAAGGTTGATGCTGATCAGTCAGATTTAAGATTTTGCTTCCGGATTATCTCACCAGTAAAGAACTATACATTGCAGGCAGAAAATGCAGTGGACCAGATGGATTGGATTGAAAAAATGACCAGAGTAATTGCTTCCTTGTTGAGTGTTCAGTCAGTAGAAATGCCTCTCACAGCTGACTCTGAAAGTGGTGGATGTTCCTCTTCAAGCAAGAGTGATATGCTGGAAAACTTTCAAGACGATATTCAACCAATGAGTAAGGAGTGTGCATCCAAGAACATCACTTCAAATAATCATTTGCGTGAATATAAAAGTTTTCAGTTGCATAAAGAGAGCACAAGAGGTGAAATACCAATTGATGTTCTTAGAAGGGTTAGTGGAAATGACAGATGTGCTGATTGTGGTAAACTGGAACCAGACTGGGCATCCTTAAACCTTGGTATTCTCATATGCATCGAGTGTTCTGGCGTTCATCGTAATCTTGGTGTACACATATCGAAGGTAAGATCACTGACACTTGATGTGAAAGTCTGGGATCCTTCCGTCCTAACCATGTTTCAGTCCCTGGGCAATCATTTTGCAAACTCAGTTTGGGAAGAGAAGTTGCATTCAGCAAGTAAAATGCGAGCTGTTGACATGACTGTTGAAAACAAATTACTTCGTGCGAGGAAACCAGAACATGATGATTCTATTTCATTAAAAGAGAGGTTCATCCATGCAAAGTATTCTGAGAAAATCTTTGTCGATCGGATAAAGAATAACAACCTTCTCCTGTCAGTGGCACAACAGTTGTGGGAAAGCGTCTGTGCCAATGACAAGAAGTCAGCGTACCGGCATATTGTGAAGTCCGATTTGGATCTCAATGCTGTCTGTGGACAAGAATATTTTGATGATGCTTTTGACATGCCTTCTTCAAGCAATTCAAAATCTTCAGCTAAGGGTGAAAATCAGCCAATAGAGGACATACTTGATGGTTCAACTGTGCTTCACCTGGCATGCCTGACTGCTGACATTGCCATGGTGGAGCTGCTCTTACAACATGGCGCAGACATAAACGCTTCCGATTCAAGAGGTCGCTCACCACTGCATTACTGTATTATTAGAGGGAAGAATGCAACTGCAAAATTGCTTCTTACGAGGGGGGCCAATCCACATGCCGCAGACGATGAGGGCAATACACCCCTTAAACTTGCATCAGAATCCGCATCTATTGGCAATGACGTTCTCGCCCTCATTACAAGAAGATGA | 2394 | 0.4273 | MHFAKLDDSPMFRQQLQCLEEGVDSLRGRCLKFYKGCRKYTEGLGEGYDGDIAFASALETFGGGHGDPLFVALGGPVMTKFTIALREIGTYKEVLRSQVEHMLSDRLLHILNVDIIDVKEARKRFDKASLVYDQARDKFLSLRKSTRMDVATAIEEEWHSARDSFEEARCNLVSALNNVEAKKRFEFLEAVSGIMDAHLRYFQQGYQLLHQMEPFITEVLAYAQQSRESYNTDQISLNEKMQEFKRQIHQESRLSLNGPHGSPGECAQPFSRISNEVVDAVKESAANGKVQIIRQGFLSKRSSNLRGDWKRRYFVLDSRGMLFYYRKPWNLAHNSNPPSLQRNNANENGHGLLSRWLSSHYHGGVHDERSVARHAVNLLTSTIKVDADQSDLRFCFRIISPVKNYTLQAENAVDQMDWIEKMTRVIASLLSVQSVEMPLTADSESGGCSSSSKSDMLENFQDDIQPMSKECASKNITSNNHLREYKSFQLHKESTRGEIPIDVLRRVSGNDRCADCGKLEPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDPSVLTMFQSLGNHFANSVWEEKLHSASKMRAVDMTVENKLLRARKPEHDDSISLKERFIHAKYSEKIFVDRIKNNNLLLSVAQQLWESVCANDKKSAYRHIVKSDLDLNAVCGQEYFDDAFDMPSSSNSKSSAKGENQPIEDILDGSTVLHLACLTADIAMVELLLQHGADINASDSRGRSPLHYCIIRGKNATAKLLLTRGANPHAADDEGNTPLKLASESASIGNDVLALITRR | 797 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr12g00381 | 797 | PANTHER | CENTAURIN/ARF | 3 | 793 | IPR045258 | GO:0005096 | |
Accr12g00381 | 797 | SUPERFAMILY | BAR/IMD domain-like | 6 | 314 | IPR027267 | - | |
Accr12g00381 | 797 | SMART | arf_gap_3 | 498 | 637 | IPR001164 | GO:0005096 | |
Accr12g00381 | 797 | CDD | BAR_SFC_plant | 15 | 215 | IPR035670 | - | |
Accr12g00381 | 797 | SMART | PH_update | 292 | 429 | IPR001849 | - | |
Accr12g00381 | 797 | SUPERFAMILY | PH domain-like | 203 | 427 | - | - | |
Accr12g00381 | 797 | Pfam | PH domain | 293 | 426 | IPR001849 | - | |
Accr12g00381 | 797 | ProSiteProfiles | Ankyrin repeat region circular profile. | 739 | 771 | - | - | |
Accr12g00381 | 797 | ProSiteProfiles | Ankyrin repeat profile. | 706 | 738 | IPR002110 | GO:0005515 | |
Accr12g00381 | 797 | ProSiteProfiles | Ankyrin repeat profile. | 739 | 771 | IPR002110 | GO:0005515 | |
Accr12g00381 | 797 | SMART | 5bar | 2 | 218 | IPR004148 | GO:0005515|GO:0005737 | |
Accr12g00381 | 797 | SUPERFAMILY | Ankyrin repeat | 705 | 783 | IPR036770 | - | |
Accr12g00381 | 797 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 498 | 637 | IPR001164 | GO:0005096 | |
Accr12g00381 | 797 | Pfam | Putative GTPase activating protein for Arf | 503 | 631 | IPR001164 | GO:0005096 | |
Accr12g00381 | 797 | Gene3D | Arf GTPase activating protein | 478 | 638 | IPR038508 | - | |
Accr12g00381 | 797 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 502 | 631 | IPR037278 | - | |
Accr12g00381 | 797 | Gene3D | - | 284 | 437 | IPR011993 | - | |
Accr12g00381 | 797 | ProSiteProfiles | PH domain profile. | 291 | 427 | IPR001849 | - | |
Accr12g00381 | 797 | Pfam | BAR domain of APPL family | 6 | 232 | IPR004148 | GO:0005515|GO:0005737 | |
Accr12g00381 | 797 | Gene3D | - | 647 | 796 | IPR036770 | - | |
Accr12g00381 | 797 | CDD | PH_ACAP | 294 | 431 | - | - | |
Accr12g00381 | 797 | ProSiteProfiles | Ankyrin repeat region circular profile. | 706 | 737 | - | - | |
Accr12g00381 | 797 | SMART | ANK_2a | 706 | 735 | IPR002110 | GO:0005515 | |
Accr12g00381 | 797 | SMART | ANK_2a | 739 | 768 | IPR002110 | GO:0005515 | |
Accr12g00381 | 797 | Pfam | Ankyrin repeats (3 copies) | 711 | 791 | IPR002110 | GO:0005515 | |
Accr12g00381 | 797 | Gene3D | Arfaptin homology (AH) domain/BAR domain | 4 | 250 | IPR027267 | - | |
Accr12g00381 | 797 | FunFam | ADP-ribosylation factor GTPase-activating protein AGD1 | 480 | 638 | - | - | |
Accr12g00381 | 797 | CDD | ArfGap | 501 | 624 | - | - | |
Accr12g00381 | 797 | Coils | Coil | 118 | 138 | - | - | |
Accr12g00381 | 797 | PRINTS | HIV Rev interacting protein signature | 552 | 573 | IPR001164 | GO:0005096 | |
Accr12g00381 | 797 | PRINTS | HIV Rev interacting protein signature | 510 | 529 | IPR001164 | GO:0005096 | |
Accr12g00381 | 797 | PRINTS | HIV Rev interacting protein signature | 529 | 546 | IPR001164 | GO:0005096 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr12g00381 | Accr-Chr12 | 3533276 | 3553033 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr12g00381 | 501 | 631 | C2H2 Transcription Factor Family | AT3G07940 | 37.405 | 6.76e-20 | 89.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr12g00381 | K12489 | - | qsa:O6P43_030661 | 1131.32 |